Releases: biolink/kgx
Releases · biolink/kgx
v2.6.0
What's Changed
- hacky fix to let kgx transforrm obojson -> tsv || to enable synonym properties by default by @iQuxLE in #513
- Bump tornado from 6.4.2 to 6.5.1 by @dependabot[bot] in #514
- Adds duckdb source (assuming nodes and edges tables), plus tests by @kevinschaper in #520
Full Changelog: v2.5.1...v2.6.0
v2.5.1
2.5.0
What's Changed
- Bump jinja2 from 3.1.3 to 3.1.5 by @dependabot in #503
- Checks if synonym val exists before access by @matentzn in #502
- Bump requests from 2.31.0 to 2.32.0 by @dependabot in #493
- Bump virtualenv from 20.25.1 to 20.26.6 by @dependabot in #504
- fix docs, refresh sphinx, regenerate index by @sierra-moxon in #507
- trapi source/sink stubs and transform docs by @sierra-moxon in #506
- refactor docs to all be in the same place by @sierra-moxon in #508
- fix link in documentation by @andrewsu in #510
- Preserve 'exactSynonym' when transforming OBOJSON to KGX TSV by @iQuxLE in #511
New Contributors
- @matentzn made their first contribution in #502
- @andrewsu made their first contribution in #510
- @iQuxLE made their first contribution in #511
Full Changelog: v2.4.2...2.5.0
v2.5.0-rc1
What's Changed
- Bump jinja2 from 3.1.3 to 3.1.5 by @dependabot in #503
- Checks if synonym val exists before access by @matentzn in #502
- Bump requests from 2.31.0 to 2.32.0 by @dependabot in #493
- Bump virtualenv from 20.25.1 to 20.26.6 by @dependabot in #504
- fix docs, refresh sphinx, regenerate index by @sierra-moxon in #507
- trapi source/sink stubs and transform docs by @sierra-moxon in #506
New Contributors
Full Changelog: v2.4.2...v2.5.0-rc1
v2.4.2
v2.4.1
What's Changed
- add "parquet source" mapped to "GraphSource" to support parquet sink support by @sierra-moxon in #490
- Bump urllib3 from 2.1.0 to 2.2.2 by @dependabot in #494
- Bump certifi from 2023.11.17 to 2024.7.4 by @dependabot in #495
- Bump zipp from 3.17.0 to 3.19.1 by @dependabot in #496
- Bump setuptools from 69.0.2 to 70.0.0 by @dependabot in #497
- Update neo4j dependency version by @hrshdhgd in #498
Full Changelog: v2.4.0...v2.4.1
v2.4.0
v2.3.3
What's Changed
- upgrade bmt to 1.3.0 by @sierra-moxon in #486
- Add Parquet sink support by @caufieldjh in #483
- Bump idna from 3.6 to 3.7 by @dependabot in #487
- Fixing KGX to support testing knowledge_level and agent_type by @sierra-moxon in #488
Full Changelog: v2.3.2...v2.3.3
v2.3.2
What's Changed
- update linkml, linkml-runtime, bmt, tests to take advantage of newer biolink model by @sierra-moxon in #485
Full Changelog: v2.3.1...v2.3.2
v2.3.1
What's Changed
Full Changelog: v2.3.0...v2.3.1