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Run a flux balance model feed the output from the FBA to a dynamic simulation

enhancementNew feature or requestNew feature or request

Status: Open.

Feature

#68 In biosimulations/compose-api;

· Ezequiel-Valencia opened on Dec 16, 2025

ReaDDy Process

enhancementNew feature or requestNew feature or request

Status: Open.

Feature

#67 In biosimulations/compose-api;

· Ezequiel-Valencia opened on Dec 16, 2025

PBIF Has Source Information for Steps

enhancementNew feature or requestNew feature or request

Status: Open.

Feature

#66 In biosimulations/compose-api;

· Ezequiel-Valencia opened on Dec 16, 2025

Parameter Scan Feeds Into Comparison

enhancementNew feature or requestNew feature or request

Status: Open.

Task

#65 In biosimulations/compose-api;

· Ezequiel-Valencia opened on Dec 3, 2025

Consolidate BioSimulator Repositories

enhancementNew feature or requestNew feature or request

Status: Open.

Task

#63 In biosimulations/compose-api;

· Ezequiel-Valencia opened on Dec 2, 2025

Parse HPC Logs with Fluentbit

help wantedExtra attention is neededExtra attention is needed

Status: Open.

Task

#60 In biosimulations/compose-api;

· Ezequiel-Valencia opened on Oct 24, 2025

Ansible for Fake Root Setup

enhancementNew feature or requestNew feature or request

Status: Open.

Task

#59 In biosimulations/compose-api;

· Ezequiel-Valencia opened on Oct 24, 2025

Save What Has Been Uploaded for Introspection

enhancementNew feature or requestNew feature or request

Status: Open.

Feature

#57 In biosimulations/compose-api;

· Ezequiel-Valencia opened on Oct 22, 2025

Restructure Project

Status: Open.

Task

#53 In biosimulations/compose-api;

· Ezequiel-Valencia opened on Oct 16, 2025

Deleting Simulator in DB Also Deletes Simulator in File System

bugSomething isn't workingSomething isn't working

enhancementNew feature or requestNew feature or request

Status: Open.

Feature

#52 In biosimulations/compose-api;

· Ezequiel-Valencia opened on Oct 15, 2025

Versioning of Packages

enhancementNew feature or requestNew feature or request

Status: Open.

Feature

#48 In biosimulations/compose-api;

· Ezequiel-Valencia opened on Oct 8, 2025

Check Dependencies of Whitelisted Packages

bugSomething isn't workingSomething isn't working

Status: Open.

Bug

#46 In biosimulations/compose-api;

· Ezequiel-Valencia opened on Oct 7, 2025