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add 'hemisphere' option to heatmap() #27

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Dec 21, 2023
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3 changes: 2 additions & 1 deletion brainglobe_heatmap/heatmaps.py
Original file line number Diff line number Diff line change
Expand Up @@ -54,6 +54,7 @@
values: Dict[str, float],
position: Union[list, tuple, np.ndarray],
orientation: Union[str, tuple] = "frontal",
hemisphere: str = "both",
title: Optional[str] = None,
cmap: str = "Reds",
vmin: Optional[float] = None,
Expand Down Expand Up @@ -89,7 +90,7 @@
self.prepare_colors(values, cmap, vmin, vmax)

# add regions to the brainrender scene
self.scene.add_brain_region(*self.values.keys())
self.scene.add_brain_region(*self.values.keys(), hemisphere=hemisphere)

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self.regions_meshes = [
r
Expand Down