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Build and Test GATK 4

Output exit result to stderr instead of stdout to allow pipelines #5362

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Output exit result to stderr instead of stdout to allow pipelines

Output exit result to stderr instead of stdout to allow pipelines #5362

Re-run triggered May 19, 2025 18:24
@lbergelsonlbergelson
#9176
pontushojer:fix-5790
Status Success
Total duration 44m 6s
Artifacts 7

gatk-tests.yml

on: pull_request
check if the environment has privileges
0s
check if the environment has privileges
build and push gatk docker to artifacts
11m 50s
build and push gatk docker to artifacts
Validate script WDLs using womtools
46s
Validate script WDLs using womtools
Validate generated WDLs using womtools
14m 45s
Validate generated WDLs using womtools
Matrix: wdlTests
Matrix: test
Matrix: testOnDocker
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1 warning
Java 17.0.6+10 build and test cloud
No files were found with the provided path: build/reports/tests. No artifacts will be uploaded.

Artifacts

Produced during runtime
Name Size Digest
gatkDockerImage Expired
2.21 GB
sha256:3c088d6fa1d1e6ef21b08245a8595acef12e86b76c67fa143f086e711432e230
test-results-17.0.6+10-integration Expired
574 KB
sha256:179a75bdb546dbdca3da1b8ba38794183a3a8f6b0105ebcbbfb91c3a638cf658
test-results-17.0.6+10-unit Expired
5.06 MB
sha256:50c2fff193878f50e37261dc97e2de1c6d6df02bffc2013e3e3f2cd4164d9a24
test-results-docker-17.0.6+10-conda Expired
53.1 KB
sha256:34674c71cc2f07fd2f4e76af91a8742f67d6fed7c816e6b627b713c009509a0e
test-results-docker-17.0.6+10-integration Expired
576 KB
sha256:e58bbe746b44911cd1319a4525d32efd6d70028359a965a843d28a9654063d29
test-results-docker-17.0.6+10-unit Expired
4.92 MB
sha256:e18fa9f36cb18ab4959f9178a5d7e060596be8438feaf988911527aeee6e1f62
test-results-docker-17.0.6+10-variantcalling Expired
31.8 KB
sha256:aa1f5fb48dc1dc664fc79a8a8687be578d07e18f3b1325185e3e99b3b7f5e6f6