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CRAM 3.1 read support #5570

CRAM 3.1 read support

CRAM 3.1 read support #5570

Triggered via pull request June 30, 2025 13:55
Status Success
Total duration 50m 11s
Artifacts 8

gatk-tests.yml

on: pull_request
check if the environment has privileges
3s
check if the environment has privileges
build and push gatk docker to artifacts
12m 53s
build and push gatk docker to artifacts
Validate script WDLs using womtools
1m 12s
Validate script WDLs using womtools
Validate generated WDLs using womtools
14m 10s
Validate generated WDLs using womtools
Matrix: wdlTests
Matrix: test
Matrix: testOnDocker
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Annotations

7 errors
unit build and test Java 17.0.6+10
The v0 series of google-github-actions/auth is no longer maintained. It will not receive updates, improvements, or security patches. Please upgrade to the latest supported versions: https://github.com/google-github-actions/auth
cloud build and test Java 17.0.6+10
The v0 series of google-github-actions/auth is no longer maintained. It will not receive updates, improvements, or security patches. Please upgrade to the latest supported versions: https://github.com/google-github-actions/auth
integration build and test Java 17.0.6+10
The v0 series of google-github-actions/auth is no longer maintained. It will not receive updates, improvements, or security patches. Please upgrade to the latest supported versions: https://github.com/google-github-actions/auth
unit test on docker Java 17.0.6+10
The v0 series of google-github-actions/auth is no longer maintained. It will not receive updates, improvements, or security patches. Please upgrade to the latest supported versions: https://github.com/google-github-actions/auth
conda test on docker Java 17.0.6+10
The v0 series of google-github-actions/auth is no longer maintained. It will not receive updates, improvements, or security patches. Please upgrade to the latest supported versions: https://github.com/google-github-actions/auth
variantcalling test on docker Java 17.0.6+10
The v0 series of google-github-actions/auth is no longer maintained. It will not receive updates, improvements, or security patches. Please upgrade to the latest supported versions: https://github.com/google-github-actions/auth
integration test on docker Java 17.0.6+10
The v0 series of google-github-actions/auth is no longer maintained. It will not receive updates, improvements, or security patches. Please upgrade to the latest supported versions: https://github.com/google-github-actions/auth

Artifacts

Produced during runtime
Name Size Digest
gatkDockerImage Expired
2.21 GB
sha256:e0f260f3ede5e33fa4c8415a046c976ab3b78eecdac4594de4dc29cf9bd724ff
test-results-17.0.6+10-cloud Expired
82.2 KB
sha256:29b2478d9a864af0ff5d7a3f819d8149220005e161e3708307f6f9da328d427a
test-results-17.0.6+10-integration Expired
580 KB
sha256:2881c9c94ce0aeefe0102bfb39ad15ebe31955f1b358508f0575f21498ab07ee
test-results-17.0.6+10-unit Expired
5.06 MB
sha256:ef1f06f1a521c698b13aa5521694a04e78c6b44c3c2b228bc78c7af066f322a7
test-results-docker-17.0.6+10-conda Expired
52.8 KB
sha256:e6f9ae8a0307560d18e4fcc79ea6c81a786e73016379563a2a3e0359485ac51b
test-results-docker-17.0.6+10-integration Expired
584 KB
sha256:aa79423971cbabb8ed6267f6bef0581c9bcf7815b15ac75c49cb3ff278acd7bd
test-results-docker-17.0.6+10-unit Expired
4.92 MB
sha256:472fcd90a66a41037396f22b98b46930d72de56d54d722940ee282f2d00a3d25
test-results-docker-17.0.6+10-variantcalling Expired
31.8 KB
sha256:a97ad00697dd220616c1972a7cf591d4801d6ea71625c3dfd7f00b62215beb4e