one-off resource tune for outliers: bump for samtools mpileup

broadinstitute · Jan 22, 2024 · 34d754d · 34d754d
1 parent 50d7235
commit 34d754d
Showing 1 changed file with 2 additions and 2 deletions.
diff --git a/wdl/tasks/Utility/BAMutils.wdl b/wdl/tasks/Utility/BAMutils.wdl
@@ -1404,9 +1404,9 @@ task BamToRelevantPileup {
     >>>
 
     Int cores = 12
-    Int memory = 4 + cores
+    Int memory = 24 + cores
     Int local_ssd_sz = if size(bam, "GiB") > 150 then 750 else 375
-    Int pd_sz = 10 + 2 * ceil(size(bam, "GiB"))
+    Int pd_sz = 50 + 2 * ceil(size(bam, "GiB"))
     Int disk_size = if "LOCAL" == disk_type then local_ssd_sz else pd_sz
 
     runtime {