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Add BarcodeExtractor workflow to extract the barcodes from each inut_bam #458

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Add BarcodeExtractor workflow to extract the barcodes from each inut_bam #458

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shadizaheri
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This PR introduces the BarcodeExtractor workflow which extracts barcodes from BAM files and creates a movie_name.barcode for each sample. The following changes were made:

  • Added BarcodeExtractor.wdl to define the workflow and task.

The BarcodeExtractor workflow:

  • Takes an input BAM file, sample ID, and movie name.
  • Extracts the barcode using a Python script.
  • Outputs the barcode and movie_name.barcode for each sample.

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