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CollectMultipleMetrics Skip making charts if R is not installed #1808

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nh13 opened this issue May 19, 2022 · 1 comment
Open

CollectMultipleMetrics Skip making charts if R is not installed #1808

nh13 opened this issue May 19, 2022 · 1 comment

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@nh13
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nh13 commented May 19, 2022

I installed picard via picard-slim on bioconda, as I don't want to bloat my environment with an R install. I don't want/need the charts/histograms, so I was expecting the tool to work just fine, as the individual tools don't require that a chart be output. Thoughts on a PR to adding an option SKIP_PLOTS or whatever your preference would be?

@matthdsm
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This would be quite useful for ALL tools which use R or any other external dependency to draw plots.

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