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force COLLATE_CUTADAPT_JSONS to run on 1 cpu #21

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force COLLATE_CUTADAPT_JSONS to run on 1 cpu #21

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c6198fa
force COLLATE_CUTADAPT_JSONS to run on 1 cpu
y-popov Oct 13, 2023
4cc83f2
fix linting
y-popov Oct 13, 2023
8b205eb
update version and changelog
vaofford Jan 24, 2024
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8 changes: 5 additions & 3 deletions CHANGELOG.md
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Expand Up @@ -50,7 +50,9 @@ Initial release of QUANTS, created with the [nf-core](https://nf-co.re/) templat

* Collation of cutadapt JSON results into single JSON file
* Collation of SeqKit statistics results into a single TSV file
* Update version of pyQUEST to version 1.1.0
* Improved handling of 0-length reads
* Ability to extract top 50 library-independent counts as FASTA
* Update version of pyQUEST to version 1.1.0
* Improved handling of 0-length reads
* Ability to extract top 50 library-independent counts as FASTA
## 3.0.0.3 - [24th January 2024]

* Hotfix to force COLLATE_CUTADAPT_JSONS to run on 1 cpu
1 change: 1 addition & 0 deletions conf/base.config
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Expand Up @@ -57,5 +57,6 @@ process {

withName:COLLATE_CUTADAPT_JSONS {
executor = 'local'
cpus = 1
}
}
2 changes: 1 addition & 1 deletion nextflow.config
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Expand Up @@ -190,7 +190,7 @@ manifest {
description = 'Analysis pipeline for saturation genome editing screens'
mainScript = 'main.nf'
nextflowVersion = '!>=21.10.6'
version = '3.0.0.2'
version = '3.0.0.3'
}

// Function to ensure that resource requirements don't go beyond
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