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Error "No such file or directory) Error parsing loci file line" when run ascat.pl

Status: Open.

#120 In cancerit/ascatNgs;

· yufanzhouonline opened on Aug 20, 2024

Security vulnerabilities in the published container image

Status: Open.

#119 In cancerit/ascatNgs;

· verdurin opened on Jul 26, 2023

Error: Expected ASCAT output file missing

Status: Open.

#118 In cancerit/ascatNgs;

· tanakash1028 opened on Feb 12, 2023

Force output to generate ASPCF data

Status: Open.

#115 In cancerit/ascatNgs;

· tomvdbosch opened on Mar 2, 2022

Error in implement_ascat: dim(X) must have a positive length

Status: Open.

#114 In cancerit/ascatNgs;

· imendes93 opened on Dec 16, 2021

typo in <code>-l</code> option

Status: Open.

#113 In cancerit/ascatNgs;

· keiranmraine opened on Nov 2, 2021

ascat error occuring with creation of scratch dir

Status: Open.

#99 In cancerit/ascatNgs;

· anoronh4 opened on Oct 30, 2020

Disagreement between wiki and actual usage for ascatSnpPanelMerge

Status: Open.

#93 In cancerit/ascatNgs;

· cboursnell opened on Jun 16, 2020

Problem generating SNPpositions for GRCh38

documentation

Status: Open.

#92 In cancerit/ascatNgs;

· WillieYu opened on Apr 17, 2020

Error running ascat.pl?

Status: Open.

#90 In cancerit/ascatNgs;

· vymao opened on Jan 22, 2020

Legacy PCAP referenced in setup.sh

Status: Open.

#86 In cancerit/ascatNgs;

· keiranmraine opened on Sep 6, 2019

Getting prob number and segment mean from scatncg copynumber

Status: Open.

#84 In cancerit/ascatNgs;

· beginner984 opened on Apr 22, 2019