Docs and versions

Dockerfile

@@ -45,7 +45,7 @@ MAINTAINER  [email protected]
 
 LABEL vendor="Cancer, Ageing and Somatic Mutation, Wellcome Trust Sanger Institute"
 LABEL uk.ac.sanger.cgp.description="PCAP-core for dockstore.org"
-LABEL uk.ac.sanger.cgp.version="3.0.0-rc8"
+LABEL uk.ac.sanger.cgp.version="3.0.0"
 
 RUN apt-get -yq update
 RUN apt-get install -yq --no-install-recommends\

README.md

@@ -11,7 +11,21 @@ packaged specifically for use with the [Dockstore.org](https://dockstore.org/) f
 | --------------------------------------------- | ----------------------------------------------- |
 | [![Master Badge][travis-master]][travis-base] | [![Develop Badge][travis-develop]][travis-base] |
 
-## Supports input in following formats:
+<!-- TOC depthFrom:2 depthTo:6 withLinks:1 updateOnSave:1 orderedList:0 -->
+
+- [Supported input formats:](#supported-input-formats)
+- [Options for customisation:](#options-for-customisation)
+- [Usable Cores](#usable-cores)
+- [Other uses](#other-uses)
+	- [Native docker](#native-docker)
+	- [Singularity](#singularity)
+- [Test data](#test-data)
+- [Release process](#release-process)
+- [LICENCE](#licence)
+
+<!-- /TOC -->
+
+## Supported input formats:
 
 * Multiple BAM
 * Multiple CRAM

cwls/mixins/requirements.yml

@@ -1,2 +1,2 @@
 class: DockerRequirement
-dockerPull: "quay.io/wtsicgp/dockstore-cgpmap:3.0.0-rc8"
+dockerPull: "quay.io/wtsicgp/dockstore-cgpmap:3.0.0"