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Data description + minor edits #83

Merged
merged 2 commits into from
Sep 17, 2023
Merged

Data description + minor edits #83

merged 2 commits into from
Sep 17, 2023

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csoneson
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github-actions bot commented Sep 17, 2023

Thank you!

Thank you for your pull request 😃

🤖 This automated message can help you check the rendered files in your submission for clarity. If you have any questions, please feel free to open an issue in {sandpaper}.

If you have files that automatically render output (e.g. R Markdown), then you should check for the following:

  • 🎯 correct output
  • 🖼️ correct figures
  • ❓ new warnings
  • ‼️ new errors

Rendered Changes

🔍 Inspect the changes: https://github.com/carpentries-incubator/bioc-rnaseq/compare/md-outputs..md-outputs-PR-83

The following changes were observed in the rendered markdown documents:

 03-import-annotate.md                              |   7 +-
 04-exploratory-qc.md                               |   8 +--
 05-differential-expression.md                      |  14 ++--
 07-gene-set-analysis.md                            |  71 ++++++++++-----------
 fig/04-exploratory-qc-rendered-pca-exercise-1.png  | Bin 15088 -> 14879 bytes
 ...erential-expression-rendered-heatmap-time-1.png | Bin 22620 -> 22618 bytes
 fig/07-gene-set-analysis-rendered-hypergeom-1.png  | Bin 191050 -> 190993 bytes
 md5sum.txt                                         |   8 +--
 8 files changed, 54 insertions(+), 54 deletions(-)
What does this mean?

If you have source files that require output and figures to be generated (e.g. R Markdown), then it is important to make sure the generated figures and output are reproducible.

This output provides a way for you to inspect the output in a diff-friendly manner so that it's easy to see the changes that occur due to new software versions or randomisation.

⏱️ Updated at 2023-09-17 11:44:07 +0000

github-actions bot pushed a commit that referenced this pull request Sep 17, 2023
@csoneson csoneson merged commit 6c4cabb into main Sep 17, 2023
3 checks passed
@csoneson csoneson deleted the data-desc branch September 17, 2023 17:29
github-actions bot pushed a commit that referenced this pull request Sep 17, 2023
Auto-generated via {sandpaper}
Source  : 6c4cabb
Branch  : main
Author  : Charlotte Soneson <[email protected]>
Time    : 2023-09-17 17:29:13 +0000
Message : Merge pull request #83 from carpentries-incubator/data-desc

Data description + minor edits
github-actions bot pushed a commit that referenced this pull request Sep 17, 2023
Auto-generated via {sandpaper}
Source  : dbbf633
Branch  : md-outputs
Author  : GitHub Actions <[email protected]>
Time    : 2023-09-17 17:41:24 +0000
Message : markdown source builds

Auto-generated via {sandpaper}
Source  : 6c4cabb
Branch  : main
Author  : Charlotte Soneson <[email protected]>
Time    : 2023-09-17 17:29:13 +0000
Message : Merge pull request #83 from carpentries-incubator/data-desc

Data description + minor edits
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