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‎2.8-SNAPHSHOT/docs/api/META-INF/MANIFEST.MF‎

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Manifest-Version: 1.0
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Created-By: Maven Javadoc Plugin 3.4.1
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Build-Jdk-Spec: 17
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‎2.8-SNAPHSHOT/docs/api/allclasses-index.html‎

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<!DOCTYPE HTML>
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<html lang="de">
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<head>
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<!-- Generated by javadoc (17) on Wed Sep 06 17:26:24 CEST 2023 -->
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<title>All Classes and Interfaces (cdk-scaffold 2.8-SNAPSHOT API)</title>
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<meta name="viewport" content="width=device-width, initial-scale=1">
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<meta http-equiv="Content-Type" content="text/html; charset=UTF-8">
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<meta name="dc.created" content="2023-09-06">
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<meta name="description" content="class index">
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<script type="text/javascript" src="script-dir/jquery-3.5.1.min.js"></script>
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</head>
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<body class="all-classes-index-page">
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<script type="text/javascript">var evenRowColor = "even-row-color";
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var oddRowColor = "odd-row-color";
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var activeTableTab = "active-table-tab";
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<!-- ========= START OF TOP NAVBAR ======= -->
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<div class="skip-nav"><a href="#skip-navbar-top" title="Skip navigation links">Skip navigation links</a></div>
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<ul id="navbar-top-firstrow" class="nav-list" title="Navigation">
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<li><a href="org/openscience/cdk/tools/scaffold/package-summary.html">Package</a></li>
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<li>Class</li>
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<li>Use</li>
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<li><a href="overview-tree.html">Tree</a></li>
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<li><a href="index-all.html">Index</a></li>
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<li><a href="help-doc.html#all-classes">Help</a></li>
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</ul>
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</div>
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</header>
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<div class="flex-content">
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<main role="main">
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<div class="header">
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<h1 title="All Classes and Interfaces" class="title">All Classes and Interfaces</h1>
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</div>
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<div id="all-classes-table">
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<div class="table-tabs" role="tablist" aria-orientation="horizontal"><button id="all-classes-table-tab0" role="tab" aria-selected="true" aria-controls="all-classes-table.tabpanel" tabindex="0" onkeydown="switchTab(event)" onclick="show('all-classes-table', 'all-classes-table', 2)" class="active-table-tab">All Classes and Interfaces</button><button id="all-classes-table-tab2" role="tab" aria-selected="false" aria-controls="all-classes-table.tabpanel" tabindex="-1" onkeydown="switchTab(event)" onclick="show('all-classes-table', 'all-classes-table-tab2', 2)" class="table-tab">Classes</button><button id="all-classes-table-tab3" role="tab" aria-selected="false" aria-controls="all-classes-table.tabpanel" tabindex="-1" onkeydown="switchTab(event)" onclick="show('all-classes-table', 'all-classes-table-tab3', 2)" class="table-tab">Enum Classes</button></div>
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<div id="all-classes-table.tabpanel" role="tabpanel">
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<div class="summary-table two-column-summary" aria-labelledby="all-classes-table-tab0">
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<div class="table-header col-first">Class</div>
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<div class="table-header col-last">Description</div>
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<div class="col-first even-row-color all-classes-table all-classes-table-tab2"><a href="org/openscience/cdk/tools/scaffold/NetworkNode.html" title="class in org.openscience.cdk.tools.scaffold">NetworkNode</a>&lt;<a href="org/openscience/cdk/tools/scaffold/NetworkNode.html" title="type parameter in NetworkNode">MoleculeType</a>&gt;</div>
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<div class="col-last even-row-color all-classes-table all-classes-table-tab2">
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<div class="block">The NetworkNodes are nodes from which a <a href="org/openscience/cdk/tools/scaffold/ScaffoldNetwork.html" title="class in org.openscience.cdk.tools.scaffold"><code>ScaffoldNetwork</code></a> can be built.</div>
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</div>
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<div class="col-first odd-row-color all-classes-table all-classes-table-tab2"><a href="org/openscience/cdk/tools/scaffold/ScaffoldGenerator.html" title="class in org.openscience.cdk.tools.scaffold">ScaffoldGenerator</a></div>
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<div class="col-last odd-row-color all-classes-table all-classes-table-tab2">
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<div class="block">This class is designed to generate different molecule scaffolds and frameworks.</div>
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</div>
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<div class="col-first even-row-color all-classes-table all-classes-table-tab3"><a href="org/openscience/cdk/tools/scaffold/ScaffoldGenerator.ScaffoldModeOption.html" title="enum class in org.openscience.cdk.tools.scaffold">ScaffoldGenerator.ScaffoldModeOption</a></div>
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<div class="col-last even-row-color all-classes-table all-classes-table-tab3">
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<div class="block">Enum with which the type of scaffolds to be generated can be set.</div>
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</div>
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<div class="col-first odd-row-color all-classes-table all-classes-table-tab2"><a href="org/openscience/cdk/tools/scaffold/ScaffoldNetwork.html" title="class in org.openscience.cdk.tools.scaffold">ScaffoldNetwork</a></div>
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<div class="col-last odd-row-color all-classes-table all-classes-table-tab2">
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<div class="block">Top-level class to organise the NetworkNodes
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A network can have several roots and leaves.</div>
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</div>
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<div class="col-first even-row-color all-classes-table all-classes-table-tab2"><a href="org/openscience/cdk/tools/scaffold/ScaffoldNodeBase.html" title="class in org.openscience.cdk.tools.scaffold">ScaffoldNodeBase</a>&lt;<a href="org/openscience/cdk/tools/scaffold/ScaffoldNodeBase.html" title="type parameter in ScaffoldNodeBase">MoleculeType</a>&gt;</div>
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<div class="col-last even-row-color all-classes-table all-classes-table-tab2">
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<div class="block">Inspired by: <a href="https://github.com/gt4dev/yet-another-tree-structure">Another Tree Structure</a>
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<br>
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Base class of node objects.</div>
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</div>
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<div class="col-first odd-row-color all-classes-table all-classes-table-tab2"><a href="org/openscience/cdk/tools/scaffold/ScaffoldNodeCollectionBase.html" title="class in org.openscience.cdk.tools.scaffold">ScaffoldNodeCollectionBase</a></div>
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<div class="col-last odd-row-color all-classes-table all-classes-table-tab2">
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<div class="block">Base class of node collection objects.</div>
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</div>
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<div class="col-first even-row-color all-classes-table all-classes-table-tab2"><a href="org/openscience/cdk/tools/scaffold/ScaffoldTree.html" title="class in org.openscience.cdk.tools.scaffold">ScaffoldTree</a></div>
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<div class="col-last even-row-color all-classes-table all-classes-table-tab2">
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<div class="block">Top-level class to organise the TreeNodes as a tree.</div>
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</div>
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<div class="col-first odd-row-color all-classes-table all-classes-table-tab2"><a href="org/openscience/cdk/tools/scaffold/TreeNode.html" title="class in org.openscience.cdk.tools.scaffold">TreeNode</a>&lt;<a href="org/openscience/cdk/tools/scaffold/TreeNode.html" title="type parameter in TreeNode">MoleculeType</a>&gt;</div>
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<div class="col-last odd-row-color all-classes-table all-classes-table-tab2">
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<div class="block">The TreeNodes are nodes from which a <a href="org/openscience/cdk/tools/scaffold/ScaffoldTree.html" title="class in org.openscience.cdk.tools.scaffold"><code>ScaffoldTree</code></a> can be built.</div>
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</main>
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<footer role="contentinfo">
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<p class="legal-copy"><small>Copyright &#169; 2023. All rights reserved.</small></p>
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</footer>
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</html>

‎2.8-SNAPHSHOT/docs/api/allpackages-index.html‎

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<!-- Generated by javadoc (17) on Wed Sep 06 17:26:24 CEST 2023 -->
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<title>All Packages (cdk-scaffold 2.8-SNAPSHOT API)</title>
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<meta name="viewport" content="width=device-width, initial-scale=1">
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<meta http-equiv="Content-Type" content="text/html; charset=UTF-8">
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<meta name="description" content="package index">
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<meta name="generator" content="javadoc/AllPackagesIndexWriter">
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<!-- ========= START OF TOP NAVBAR ======= -->
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<div class="skip-nav"><a href="#skip-navbar-top" title="Skip navigation links">Skip navigation links</a></div>
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<ul id="navbar-top-firstrow" class="nav-list" title="Navigation">
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<li><a href="org/openscience/cdk/tools/scaffold/package-summary.html">Package</a></li>
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<li>Class</li>
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<li>Use</li>
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<li><a href="overview-tree.html">Tree</a></li>
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<li><a href="index-all.html">Index</a></li>
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<li><a href="help-doc.html#all-packages">Help</a></li>
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</ul>
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<h1 title="All&amp;nbsp;Packages" class="title">All&nbsp;Packages</h1>
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<div class="caption"><span>Package Summary</span></div>
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<div class="summary-table two-column-summary">
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<div class="table-header col-first">Package</div>
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<div class="table-header col-last">Description</div>
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<div class="col-first even-row-color"><a href="org/openscience/cdk/tools/scaffold/package-summary.html">org.openscience.cdk.tools.scaffold</a></div>
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<div class="col-last even-row-color">&nbsp;</div>
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</html>

‎2.8-SNAPHSHOT/docs/api/constant-values.html‎

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<!-- Generated by javadoc (17) on Wed Sep 06 17:26:24 CEST 2023 -->
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<title>Constant Field Values (cdk-scaffold 2.8-SNAPSHOT API)</title>
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<meta http-equiv="Content-Type" content="text/html; charset=UTF-8">
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<meta name="description" content="summary of constants">
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<meta name="generator" content="javadoc/ConstantsSummaryWriterImpl">
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<div class="skip-nav"><a href="#skip-navbar-top" title="Skip navigation links">Skip navigation links</a></div>
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<ul id="navbar-top-firstrow" class="nav-list" title="Navigation">
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<li><a href="org/openscience/cdk/tools/scaffold/package-summary.html">Package</a></li>
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<li>Class</li>
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<li>Use</li>
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<h1 title="Constant Field Values" class="title">Constant Field Values</h1>
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<section class="packages">
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<h2 title="Contents">Contents</h2>
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<ul>
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<li><a href="#org.openscience">org.openscience.*</a></li>
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</ul>
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</section>
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</div>
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<section class="constants-summary" id="org.openscience.cdk.tools.scaffold">
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<h2 title="org.openscience">org.openscience.*</h2>
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<ul class="block-list">
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<li>
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<div class="caption"><span>org.openscience.cdk.tools.scaffold.<a href="org/openscience/cdk/tools/scaffold/ScaffoldGenerator.html" title="class in org.openscience.cdk.tools.scaffold">ScaffoldGenerator</a></span></div>
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<div class="summary-table three-column-summary">
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<div class="table-header col-first">Modifier and Type</div>
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<div class="table-header col-second">Constant Field</div>
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<div class="table-header col-last">Value</div>
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<div class="col-first even-row-color"><code id="org.openscience.cdk.tools.scaffold.ScaffoldGenerator.CYCLE_FINDER_BACKUP_PROPERTY">public&nbsp;static&nbsp;final&nbsp;<a href="https://docs.oracle.com/javase/8/docs/api/java/lang/String.html" title="class or interface in java.lang" class="external-link">String</a></code></div>
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<div class="col-second even-row-color"><code><a href="org/openscience/cdk/tools/scaffold/ScaffoldGenerator.html#CYCLE_FINDER_BACKUP_PROPERTY">CYCLE_FINDER_BACKUP_PROPERTY</a></code></div>
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<div class="col-last even-row-color"><code>"CYCLE_FINDER_BACKUP_PROPERTY"</code></div>
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<div class="col-first odd-row-color"><code id="org.openscience.cdk.tools.scaffold.ScaffoldGenerator.DETERMINE_AROMATICITY_SETTING_DEFAULT">public&nbsp;static&nbsp;final&nbsp;boolean</code></div>
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<div class="col-second odd-row-color"><code><a href="org/openscience/cdk/tools/scaffold/ScaffoldGenerator.html#DETERMINE_AROMATICITY_SETTING_DEFAULT">DETERMINE_AROMATICITY_SETTING_DEFAULT</a></code></div>
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<div class="col-last odd-row-color"><code>true</code></div>
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<div class="col-first even-row-color"><code id="org.openscience.cdk.tools.scaffold.ScaffoldGenerator.RETAIN_ONLY_HYBRIDISATIONS_AT_AROMATIC_BONDS_SETTING_DEFAULT">public&nbsp;static&nbsp;final&nbsp;boolean</code></div>
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<div class="col-second even-row-color"><code><a href="org/openscience/cdk/tools/scaffold/ScaffoldGenerator.html#RETAIN_ONLY_HYBRIDISATIONS_AT_AROMATIC_BONDS_SETTING_DEFAULT">RETAIN_ONLY_HYBRIDISATIONS_AT_AROMATIC_BONDS_SETTING_DEFAULT</a></code></div>
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<div class="col-last even-row-color"><code>false</code></div>
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<div class="col-first odd-row-color"><code id="org.openscience.cdk.tools.scaffold.ScaffoldGenerator.RULE_SEVEN_APPLIED_SETTING_DEFAULT">public&nbsp;static&nbsp;final&nbsp;boolean</code></div>
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<div class="col-second odd-row-color"><code><a href="org/openscience/cdk/tools/scaffold/ScaffoldGenerator.html#RULE_SEVEN_APPLIED_SETTING_DEFAULT">RULE_SEVEN_APPLIED_SETTING_DEFAULT</a></code></div>
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<div class="col-last odd-row-color"><code>true</code></div>
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<div class="col-first even-row-color"><code id="org.openscience.cdk.tools.scaffold.ScaffoldGenerator.SCAFFOLD_ATOM_COUNTER_PROPERTY">public&nbsp;static&nbsp;final&nbsp;<a href="https://docs.oracle.com/javase/8/docs/api/java/lang/String.html" title="class or interface in java.lang" class="external-link">String</a></code></div>
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<div class="col-second even-row-color"><code><a href="org/openscience/cdk/tools/scaffold/ScaffoldGenerator.html#SCAFFOLD_ATOM_COUNTER_PROPERTY">SCAFFOLD_ATOM_COUNTER_PROPERTY</a></code></div>
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<div class="col-last even-row-color"><code>"SCAFFOLD_ATOM_COUNTER_PROPERTY"</code></div>
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‎2.8-SNAPHSHOT/docs/api/element-list‎

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org.openscience.cdk.tools.scaffold

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