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<!DOCTYPE HTML> | ||
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<title>All Classes and Interfaces (cdk-scaffold 2.8-SNAPSHOT API)</title> | ||
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<li><a href="org/openscience/cdk/tools/scaffold/package-summary.html">Package</a></li> | ||
<li>Class</li> | ||
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<div class="table-tabs" role="tablist" aria-orientation="horizontal"><button id="all-classes-table-tab0" role="tab" aria-selected="true" aria-controls="all-classes-table.tabpanel" tabindex="0" onkeydown="switchTab(event)" onclick="show('all-classes-table', 'all-classes-table', 2)" class="active-table-tab">All Classes and Interfaces</button><button id="all-classes-table-tab2" role="tab" aria-selected="false" aria-controls="all-classes-table.tabpanel" tabindex="-1" onkeydown="switchTab(event)" onclick="show('all-classes-table', 'all-classes-table-tab2', 2)" class="table-tab">Classes</button><button id="all-classes-table-tab3" role="tab" aria-selected="false" aria-controls="all-classes-table.tabpanel" tabindex="-1" onkeydown="switchTab(event)" onclick="show('all-classes-table', 'all-classes-table-tab3', 2)" class="table-tab">Enum Classes</button></div> | ||
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<div class="summary-table two-column-summary" aria-labelledby="all-classes-table-tab0"> | ||
<div class="table-header col-first">Class</div> | ||
<div class="table-header col-last">Description</div> | ||
<div class="col-first even-row-color all-classes-table all-classes-table-tab2"><a href="org/openscience/cdk/tools/scaffold/NetworkNode.html" title="class in org.openscience.cdk.tools.scaffold">NetworkNode</a><<a href="org/openscience/cdk/tools/scaffold/NetworkNode.html" title="type parameter in NetworkNode">MoleculeType</a>></div> | ||
<div class="col-last even-row-color all-classes-table all-classes-table-tab2"> | ||
<div class="block">The NetworkNodes are nodes from which a <a href="org/openscience/cdk/tools/scaffold/ScaffoldNetwork.html" title="class in org.openscience.cdk.tools.scaffold"><code>ScaffoldNetwork</code></a> can be built.</div> | ||
</div> | ||
<div class="col-first odd-row-color all-classes-table all-classes-table-tab2"><a href="org/openscience/cdk/tools/scaffold/ScaffoldGenerator.html" title="class in org.openscience.cdk.tools.scaffold">ScaffoldGenerator</a></div> | ||
<div class="col-last odd-row-color all-classes-table all-classes-table-tab2"> | ||
<div class="block">This class is designed to generate different molecule scaffolds and frameworks.</div> | ||
</div> | ||
<div class="col-first even-row-color all-classes-table all-classes-table-tab3"><a href="org/openscience/cdk/tools/scaffold/ScaffoldGenerator.ScaffoldModeOption.html" title="enum class in org.openscience.cdk.tools.scaffold">ScaffoldGenerator.ScaffoldModeOption</a></div> | ||
<div class="col-last even-row-color all-classes-table all-classes-table-tab3"> | ||
<div class="block">Enum with which the type of scaffolds to be generated can be set.</div> | ||
</div> | ||
<div class="col-first odd-row-color all-classes-table all-classes-table-tab2"><a href="org/openscience/cdk/tools/scaffold/ScaffoldNetwork.html" title="class in org.openscience.cdk.tools.scaffold">ScaffoldNetwork</a></div> | ||
<div class="col-last odd-row-color all-classes-table all-classes-table-tab2"> | ||
<div class="block">Top-level class to organise the NetworkNodes | ||
A network can have several roots and leaves.</div> | ||
</div> | ||
<div class="col-first even-row-color all-classes-table all-classes-table-tab2"><a href="org/openscience/cdk/tools/scaffold/ScaffoldNodeBase.html" title="class in org.openscience.cdk.tools.scaffold">ScaffoldNodeBase</a><<a href="org/openscience/cdk/tools/scaffold/ScaffoldNodeBase.html" title="type parameter in ScaffoldNodeBase">MoleculeType</a>></div> | ||
<div class="col-last even-row-color all-classes-table all-classes-table-tab2"> | ||
<div class="block">Inspired by: <a href="https://github.com/gt4dev/yet-another-tree-structure">Another Tree Structure</a> | ||
<br> | ||
Base class of node objects.</div> | ||
</div> | ||
<div class="col-first odd-row-color all-classes-table all-classes-table-tab2"><a href="org/openscience/cdk/tools/scaffold/ScaffoldNodeCollectionBase.html" title="class in org.openscience.cdk.tools.scaffold">ScaffoldNodeCollectionBase</a></div> | ||
<div class="col-last odd-row-color all-classes-table all-classes-table-tab2"> | ||
<div class="block">Base class of node collection objects.</div> | ||
</div> | ||
<div class="col-first even-row-color all-classes-table all-classes-table-tab2"><a href="org/openscience/cdk/tools/scaffold/ScaffoldTree.html" title="class in org.openscience.cdk.tools.scaffold">ScaffoldTree</a></div> | ||
<div class="col-last even-row-color all-classes-table all-classes-table-tab2"> | ||
<div class="block">Top-level class to organise the TreeNodes as a tree.</div> | ||
</div> | ||
<div class="col-first odd-row-color all-classes-table all-classes-table-tab2"><a href="org/openscience/cdk/tools/scaffold/TreeNode.html" title="class in org.openscience.cdk.tools.scaffold">TreeNode</a><<a href="org/openscience/cdk/tools/scaffold/TreeNode.html" title="type parameter in TreeNode">MoleculeType</a>></div> | ||
<div class="col-last odd-row-color all-classes-table all-classes-table-tab2"> | ||
<div class="block">The TreeNodes are nodes from which a <a href="org/openscience/cdk/tools/scaffold/ScaffoldTree.html" title="class in org.openscience.cdk.tools.scaffold"><code>ScaffoldTree</code></a> can be built.</div> | ||
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<!DOCTYPE HTML> | ||
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<title>All Packages (cdk-scaffold 2.8-SNAPSHOT API)</title> | ||
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<div class="table-header col-first">Package</div> | ||
<div class="table-header col-last">Description</div> | ||
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<!DOCTYPE HTML> | ||
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<title>Constant Field Values (cdk-scaffold 2.8-SNAPSHOT API)</title> | ||
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<h1 title="Constant Field Values" class="title">Constant Field Values</h1> | ||
<section class="packages"> | ||
<h2 title="Contents">Contents</h2> | ||
<ul> | ||
<li><a href="#org.openscience">org.openscience.*</a></li> | ||
</ul> | ||
</section> | ||
</div> | ||
<section class="constants-summary" id="org.openscience.cdk.tools.scaffold"> | ||
<h2 title="org.openscience">org.openscience.*</h2> | ||
<ul class="block-list"> | ||
<li> | ||
<div class="caption"><span>org.openscience.cdk.tools.scaffold.<a href="org/openscience/cdk/tools/scaffold/ScaffoldGenerator.html" title="class in org.openscience.cdk.tools.scaffold">ScaffoldGenerator</a></span></div> | ||
<div class="summary-table three-column-summary"> | ||
<div class="table-header col-first">Modifier and Type</div> | ||
<div class="table-header col-second">Constant Field</div> | ||
<div class="table-header col-last">Value</div> | ||
<div class="col-first even-row-color"><code id="org.openscience.cdk.tools.scaffold.ScaffoldGenerator.CYCLE_FINDER_BACKUP_PROPERTY">public static final <a href="https://docs.oracle.com/javase/8/docs/api/java/lang/String.html" title="class or interface in java.lang" class="external-link">String</a></code></div> | ||
<div class="col-second even-row-color"><code><a href="org/openscience/cdk/tools/scaffold/ScaffoldGenerator.html#CYCLE_FINDER_BACKUP_PROPERTY">CYCLE_FINDER_BACKUP_PROPERTY</a></code></div> | ||
<div class="col-last even-row-color"><code>"CYCLE_FINDER_BACKUP_PROPERTY"</code></div> | ||
<div class="col-first odd-row-color"><code id="org.openscience.cdk.tools.scaffold.ScaffoldGenerator.DETERMINE_AROMATICITY_SETTING_DEFAULT">public static final boolean</code></div> | ||
<div class="col-second odd-row-color"><code><a href="org/openscience/cdk/tools/scaffold/ScaffoldGenerator.html#DETERMINE_AROMATICITY_SETTING_DEFAULT">DETERMINE_AROMATICITY_SETTING_DEFAULT</a></code></div> | ||
<div class="col-last odd-row-color"><code>true</code></div> | ||
<div class="col-first even-row-color"><code id="org.openscience.cdk.tools.scaffold.ScaffoldGenerator.RETAIN_ONLY_HYBRIDISATIONS_AT_AROMATIC_BONDS_SETTING_DEFAULT">public static final boolean</code></div> | ||
<div class="col-second even-row-color"><code><a href="org/openscience/cdk/tools/scaffold/ScaffoldGenerator.html#RETAIN_ONLY_HYBRIDISATIONS_AT_AROMATIC_BONDS_SETTING_DEFAULT">RETAIN_ONLY_HYBRIDISATIONS_AT_AROMATIC_BONDS_SETTING_DEFAULT</a></code></div> | ||
<div class="col-last even-row-color"><code>false</code></div> | ||
<div class="col-first odd-row-color"><code id="org.openscience.cdk.tools.scaffold.ScaffoldGenerator.RULE_SEVEN_APPLIED_SETTING_DEFAULT">public static final boolean</code></div> | ||
<div class="col-second odd-row-color"><code><a href="org/openscience/cdk/tools/scaffold/ScaffoldGenerator.html#RULE_SEVEN_APPLIED_SETTING_DEFAULT">RULE_SEVEN_APPLIED_SETTING_DEFAULT</a></code></div> | ||
<div class="col-last odd-row-color"><code>true</code></div> | ||
<div class="col-first even-row-color"><code id="org.openscience.cdk.tools.scaffold.ScaffoldGenerator.SCAFFOLD_ATOM_COUNTER_PROPERTY">public static final <a href="https://docs.oracle.com/javase/8/docs/api/java/lang/String.html" title="class or interface in java.lang" class="external-link">String</a></code></div> | ||
<div class="col-second even-row-color"><code><a href="org/openscience/cdk/tools/scaffold/ScaffoldGenerator.html#SCAFFOLD_ATOM_COUNTER_PROPERTY">SCAFFOLD_ATOM_COUNTER_PROPERTY</a></code></div> | ||
<div class="col-last even-row-color"><code>"SCAFFOLD_ATOM_COUNTER_PROPERTY"</code></div> | ||
</div> | ||
</li> | ||
</ul> | ||
</section> | ||
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<p class="legal-copy"><small>Copyright © 2023. All rights reserved.</small></p> | ||
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org.openscience.cdk.tools.scaffold |
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