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feat: Ingestion config for Ais submission #363

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feat: Ingestion config for Ais submission #363

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41ad265
draft config
uermel Nov 20, 2024
d3a42e4
use new GO ID for pyrenodi tubule.
uermel Nov 24, 2024
02c6118
add new objects
uermel Dec 6, 2024
00cd87d
Merge remote-tracking branch 'origin/main' into uermel/ais_segmentations
uermel Dec 6, 2024
d2999de
add rescale/threshold values
uermel Dec 6, 2024
9c1e7c0
stub description
uermel Dec 6, 2024
eb84f87
fix glob patterns.
uermel Dec 7, 2024
fefc073
Merge remote-tracking branch 'origin/main' into uermel/ais_segmentations
uermel Jan 9, 2025
12a7bee
fix metadata retrieval for rescaling segmentation masks
uermel Jan 9, 2025
20b7b95
Merge branch 'uermel/fix_rescale' into uermel/ais_segmentations
uermel Jan 9, 2025
c3786d0
minor updates to sources
uermel Jan 9, 2025
972d06c
do not attempt importing keyphoto when dataset not imported
uermel Jan 9, 2025
dd58652
Merge branch 'uermel/fix_keyphoto_import' into uermel/ais_segmentations
uermel Jan 9, 2025
10346e2
update dates
uermel Jan 9, 2025
e1e1037
add dataset 10301 runs
uermel Jan 10, 2025
d7694fd
remove duplicate vesicle entry
uermel Jan 10, 2025
5a6d1d3
update deposition date.
uermel Jan 10, 2025
c234fe9
include threshold when checking annotation validity
uermel Jan 10, 2025
e0770d0
Merge branch 'uermel/fix_mask_validity_check' into uermel/ais_segment…
uermel Jan 10, 2025
eeb9086
reflect data reorg
uermel Jan 10, 2025
dd66b49
update paper DOI
uermel Jan 10, 2025
b247855
Merge remote-tracking branch 'origin/main' into uermel/ais_segmentations
jgadling Jan 13, 2025
2f42443
exclude pyrenoid tubule from validation.
uermel Jan 13, 2025
76ecde6
final update to deposition description and method links
uermel Jan 13, 2025
5b1e018
add deposition key photo.
uermel Jan 13, 2025
cf8329e
fix one annotation method.
uermel Jan 14, 2025
b48a561
fix execution name determination.
uermel Jan 14, 2025
a2a5aa0
Merge branch 'uermel/fix_enqueue' into uermel/ais_segmentations
uermel Jan 14, 2025
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