update to latest compas

compas-dev · Nov 17, 2023 · 39d4949 · 39d4949
1 parent 0168bce
commit 39d4949
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diff --git a/.bumpversion.cfg b/.bumpversion.cfg
@@ -3,26 +3,19 @@ current_version = 0.1.0
 message = Bump version to {new_version}
 commit = True
 tag = True
-parse = ^
-	(?P<major>\d+)\.(?P<minor>\d+)\.(?P<patch>\d+)
-	(?:
-	(?P<release>rc)
-	(?:(?P<rc>\d+(?:\.\d+)*))?
-	)?
-serialize = 
-	{major}.{minor}.{patch}{release}{rc}
-	{major}.{minor}.{patch}
-
-[bumpversion:part:release]
-optional_value = final
-values = 
-	rc
-	final
 
 [bumpversion:file:setup.py]
-search = version='{current_version}'
-replace = version='{new_version}'
+search = version="{current_version}"
+replace = version="{new_version}"
+
+[bumpversion:file:docs/conf.py]
+search = release = "{current_version}"
+replace = release = "{new_version}"
 
 [bumpversion:file:src/compas_libigl/__init__.py]
-search = __version__ = '{current_version}'
-replace = __version__ = '{new_version}'
+search = __version__ = "{current_version}"
+replace = __version__ = "{new_version}"
+
+[bumpversion:file:CHANGELOG.md]
+search = Unreleased
+replace = [{new_version}] {now:%Y-%m-%d}
diff --git a/.editorconfig b/.editorconfig
@@ -16,6 +16,9 @@ end_of_line = crlf
 [*.md]
 trim_trailing_whitespace = false
 
+[*.yml]
+indent_size = 2
+
 [Makefile]
 indent_style = tab
 indent_size = 4

diff --git a/.github/workflows/build.yml b/.github/workflows/build.yml
@@ -12,7 +12,6 @@ defaults:
   run:
     shell: powershell
 
-
 jobs:
   build-packages:
     runs-on: ${{ matrix.os }}
@@ -21,7 +20,6 @@ jobs:
         os: [macos-latest, windows-latest]
 
     steps:
-
       - uses: actions/checkout@v2
         with:
           submodules: recursive
@@ -35,7 +33,7 @@ jobs:
 
       - name: build
         run: |
-          conda install git cmake">=3.14" boost eigen COMPAS --yes
+          conda install git cmake">=3.14" boost eigen=3.3 COMPAS --yes
           pip install -r requirements-dev.txt
 
       - name: Lint with flake8

diff --git a/.github/workflows/docs.yml b/.github/workflows/docs.yml
@@ -5,7 +5,7 @@ on:
     branches:
       - main
     tags:
-      - 'v*'
+      - "v*"
   pull_request:
     branches:
       - main

diff --git a/.github/workflows/release.yml b/.github/workflows/release.yml
@@ -3,7 +3,7 @@ name: Release
 on:
   push:
     tags:
-      - 'v*'
+      - "v*"
 
 jobs:
   Release:
@@ -21,15 +21,14 @@ jobs:
           draft: false
           prerelease: false
 
-
   Publish:
     needs: Release
     runs-on: ubuntu-latest
     steps:
-    - uses: actions/checkout@v2
-    - uses: actions/setup-python@v2
-      with:
-        python-version: '3.x'
-    - uses: compas-dev/[email protected]
-      with:
-        token: ${{ secrets.PYPI }}
+      - uses: actions/checkout@v2
+      - uses: actions/setup-python@v2
+        with:
+          python-version: "3.x"
+      - uses: compas-dev/[email protected]
+        with:
+          token: ${{ secrets.PYPI }}
diff --git a/.gitignore b/.gitignore
@@ -120,3 +120,5 @@ build/**
 *.so
 
 src/compas-viewers
+
+generated
diff --git a/AUTHORS.md b/AUTHORS.md
@@ -1,3 +1,3 @@
 # Authors
 
-- Tom Van Mele <<[email protected]>> [@brgcode](https://github.com/brgcode)
+- Tom Van Mele <<[email protected]>> [@tomvanmele](https://github.com/tomvanmele)
diff --git a/CHANGELOG.md b/CHANGELOG.md
@@ -0,0 +1,14 @@
+# Changelog
+
+All notable changes to this project will be documented in this file.
+
+The format is based on [Keep a Changelog](https://keepachangelog.com/en/1.0.0/),
+and this project adheres to [Semantic Versioning](https://semver.org/spec/v2.0.0.html).
+
+## Unreleased
+
+### Added
+
+### Changed
+
+### Removed
diff --git a/DEVGUIDE.md b/DEVGUIDE.md
diff --git a/MANIFEST.in b/MANIFEST.in
@@ -1,15 +1,22 @@
 graft src
 
+prune .github
 prune data
+prune docs
+prune scripts
+prune tests
 prune temp
 
 include LICENSE
 include README.md
 include AUTHORS.md
+include CHANGELOG.md
 include requirements.txt
 
 exclude requirements-dev.txt
 exclude pytest.ini .bumpversion.cfg .editorconfig
 exclude tasks.py
+exclude conftest.py
+exclude CONTRIBUTING.md
 
 global-exclude *.py[cod] __pycache__ *.dylib *.nb[ic] .DS_Store
diff --git a/README.md b/README.md
@@ -8,7 +8,7 @@ Many of the functions provided by `compas_libigl` are based on the examples in t
 `compas_libigl` can be installed using a combination of conda and pip.
 
 ```bash
-conda create -n igl python=3.7 git cmake">=3.14" boost eigen COMPAS compas_view2 --yes
+conda create -n igl python=3.7 git cmake">=3.14" boost eigen=3.3 COMPAS compas_view2 --yes
 conda activate igl
 git clone --recursive https://github.com/BlockResearchGroup/compas_libigl.git
 cd compas_libigl

diff --git a/docs/_images/boundaries.png b/docs/_images/boundaries.png
diff --git a/docs/_images/curvature.png b/docs/_images/curvature.png
diff --git a/docs/_images/geodistance.png b/docs/_images/geodistance.png
diff --git a/docs/_images/intersections.png b/docs/_images/intersections.png
diff --git a/docs/_images/isolines.png b/docs/_images/isolines.png
diff --git a/docs/_images/massmatrix.png b/docs/_images/massmatrix.png
diff --git a/docs/_images/parametrisation.png b/docs/_images/parametrisation.png
diff --git a/docs/_images/planarize.png b/docs/_images/planarize.png
diff --git a/docs/_static/compas.css b/docs/_static/compas.css
@@ -0,0 +1,30 @@
+html[data-theme="light"] {
+    --pst-color-primary: #0092d2;
+    --pst-color-info: #0092d2;
+    --pst-color-text-muted: #888;
+}
+
+body {
+    line-height: 1.75;
+    font-weight: 300;
+}
+
+.bd-article-container h1 {
+    color: #0092d2;
+}
+
+.navbar-brand .logo__image {
+    height: 36px !important;
+}
+
+.bd-header {
+    box-shadow: none;
+    border-bottom: 1px solid var(--pst-color-shadow);
+}
+
+#rtd-footer-container {
+    height: 0px;
+    bottom: 0 !important;
+    margin: 0 !important;
+    display: none;
+}
diff --git a/docs/_static/compas.ico b/docs/_static/compas.ico
diff --git a/docs/_static/compas_icon.png b/docs/_static/compas_icon.png
diff --git a/docs/_static/compas_icon_white.png b/docs/_static/compas_icon_white.png
diff --git a/docs/_static/compas_white.ico b/docs/_static/compas_white.ico
diff --git a/docs/_static/versions.json b/docs/_static/versions.json
@@ -0,0 +1,7 @@
+[
+    {
+        "name": "latest",
+        "version": "unreleased",
+        "url": "https://compas.dev/compas_libigl/latest/"
+    }
+]
diff --git a/docs/_templates/compas-sidebar-footer.html b/docs/_templates/compas-sidebar-footer.html
@@ -0,0 +1,5 @@
+<div class="sidebar-primary-item">
+    <a href="https://compas.dev" target="_blank">
+        COMPAS.dev <i class="fa fa-external-link" aria-hidden="true"></i>
+    </a>
+</div>
diff --git a/docs/_templates/navbar-nav.html b/docs/_templates/navbar-nav.html
@@ -0,0 +1,11 @@
+<nav class="navbar-nav">
+  <!-- <p class="sidebar-header-items__title"
+     role="heading"
+     aria-level="1"
+     aria-label="{{ _('Site Navigation') }}">
+    {{ _("Site Navigation") }}
+  </p>
+  <ul class="bd-navbar-elements navbar-nav">
+    {{ generate_header_nav_html(n_links_before_dropdown=theme_header_links_before_dropdown) }}
+  </ul> -->
+</nav>
diff --git a/docs/_templates/sbt-sidebar-nav.html b/docs/_templates/sbt-sidebar-nav.html
@@ -0,0 +1,24 @@
+<nav class="bd-links" id="bd-docs-nav" aria-label="Main">
+    <div class="bd-toc-item navbar-nav active">
+        {% if theme_home_page_in_toc == True %}
+        {#- This mimicks the pydata theme list style so we can append an extra item at the top #}
+        <ul class="nav bd-sidenav bd-sidenav__home-link">
+            <li class="toctree-l1{% if pagename == root_doc %} current active{% endif %}">
+                <a class="reference internal" href="{{ pathto(root_doc) }}">
+                    {{ root_title }}
+                </a>
+            </li>
+        </ul>
+        {% endif -%}
+
+        {# Ref: https://github.com/pydata/pydata-sphinx-theme/blob/ebf7f704879a1cdc6016d6111062103353ac7677/src/pydata_sphinx_theme/__init__.py#L302 #}
+        {{- generate_toctree_html(
+            startdepth=0,
+            kind="sidebar",
+            maxdepth=theme_navigation_depth,
+            collapse=False,
+            includehidden=True,
+            titles_only=True,
+            show_nav_level=1) }}
+    </div>
+</nav>
diff --git a/docs/acknowledgements.rst b/docs/acknowledgements.rst
@@ -0,0 +1,5 @@
+********************************************************************************
+Acknowledgements
+********************************************************************************
+
+Coming soon!
diff --git a/docs/api.rst b/docs/api.rst
@@ -3,6 +3,6 @@ API Reference
 ********************************************************************************
 
 .. toctree::
-    :maxdepth: 1
+    :maxdepth: 2
 
     api/compas_libigl
diff --git a/docs/api/compas_libigl.rst b/docs/api/compas_libigl.rst
@@ -1,2 +1,24 @@
+********************************************************************************
+compas_libigl
+********************************************************************************
 
-.. automodule:: compas_libigl
+.. currentmodule:: compas_libigl
+
+Functions
+=========
+
+.. autosummary::
+    :toctree: generated/
+
+    intersection_ray_mesh
+    intersection_rays_mesh
+    trimesh_boundaries
+    trimesh_gaussian_curvature
+    trimesh_principal_curvature
+    trimesh_geodistance
+    trimesh_isolines
+    trimesh_massmatrix
+    trimesh_harmonic
+    trimesh_lscm
+    trimesh_remesh_along_isoline
+    quadmesh_planarize
diff --git a/docs/api/generated/compas_libigl.intersection_ray_mesh.rst b/docs/api/generated/compas_libigl.intersection_ray_mesh.rst
@@ -1,4 +1,4 @@
-.. rst-class:: detail
+.. rst-class:: detail
 
 intersection_ray_mesh
 ===================================

diff --git a/docs/api/generated/compas_libigl.intersection_rays_mesh.rst b/docs/api/generated/compas_libigl.intersection_rays_mesh.rst
@@ -1,4 +1,4 @@
-.. rst-class:: detail
+.. rst-class:: detail
 
 intersection_rays_mesh
 ====================================

diff --git a/docs/api/generated/compas_libigl.quadmesh_planarize.rst b/docs/api/generated/compas_libigl.quadmesh_planarize.rst
@@ -1,4 +1,4 @@
-.. rst-class:: detail
+.. rst-class:: detail
 
 quadmesh_planarize
 ================================

diff --git a/docs/api/generated/compas_libigl.trimesh_boundaries.rst b/docs/api/generated/compas_libigl.trimesh_boundaries.rst
@@ -1,4 +1,4 @@
-.. rst-class:: detail
+.. rst-class:: detail
 
 trimesh_boundaries
 ================================

diff --git a/docs/api/generated/compas_libigl.trimesh_gaussian_curvature.rst b/docs/api/generated/compas_libigl.trimesh_gaussian_curvature.rst
@@ -1,4 +1,4 @@
-.. rst-class:: detail
+.. rst-class:: detail
 
 trimesh_gaussian_curvature
 ========================================

diff --git a/docs/api/generated/compas_libigl.trimesh_geodistance.rst b/docs/api/generated/compas_libigl.trimesh_geodistance.rst
@@ -1,4 +1,4 @@
-.. rst-class:: detail
+.. rst-class:: detail
 
 trimesh_geodistance
 =================================

diff --git a/docs/api/generated/compas_libigl.trimesh_harmonic.rst b/docs/api/generated/compas_libigl.trimesh_harmonic.rst
@@ -1,4 +1,4 @@
-.. rst-class:: detail
+.. rst-class:: detail
 
 trimesh_harmonic
 ==============================

diff --git a/docs/api/generated/compas_libigl.trimesh_isolines.rst b/docs/api/generated/compas_libigl.trimesh_isolines.rst
@@ -1,4 +1,4 @@
-.. rst-class:: detail
+.. rst-class:: detail
 
 trimesh_isolines
 ==============================

diff --git a/docs/api/generated/compas_libigl.trimesh_lscm.rst b/docs/api/generated/compas_libigl.trimesh_lscm.rst
@@ -1,4 +1,4 @@
-.. rst-class:: detail
+.. rst-class:: detail
 
 trimesh_lscm
 ==========================

diff --git a/docs/api/generated/compas_libigl.trimesh_massmatrix.rst b/docs/api/generated/compas_libigl.trimesh_massmatrix.rst
@@ -1,4 +1,4 @@
-.. rst-class:: detail
+.. rst-class:: detail
 
 trimesh_massmatrix
 ================================

diff --git a/docs/api/generated/compas_libigl.trimesh_principal_curvature.rst b/docs/api/generated/compas_libigl.trimesh_principal_curvature.rst
@@ -1,4 +1,4 @@
-.. rst-class:: detail
+.. rst-class:: detail
 
 trimesh_principal_curvature
 =========================================

diff --git a/docs/api/generated/compas_libigl.trimesh_remesh_along_isoline.rst b/docs/api/generated/compas_libigl.trimesh_remesh_along_isoline.rst
@@ -1,4 +1,4 @@
-.. rst-class:: detail
+.. rst-class:: detail
 
 trimesh_remesh_along_isoline
 ==========================================