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feat/improved json #4

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e650b8e
Automatic data update
corneliusroemer Aug 3, 2023
c244be9
Produce empty lists and new aa_nuc_mappings
corneliusroemer Aug 3, 2023
14745e0
Add covariant script and better "relative" function in create_json.py
corneliusroemer Aug 4, 2023
aecac9c
Implement new structure with references treated symmetrically
corneliusroemer Aug 11, 2023
0f5ad04
Edit covariants_json.py
corneliusroemer Aug 11, 2023
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Binary file modified data/pango-consensus-sequences_ORF8-aa.fasta.zst
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Binary file modified data/pango-consensus-sequences_S-aa.fasta.zst
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416 changes: 213 additions & 203 deletions data/pango-consensus-sequences_genome-nuc.fasta.zst
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394,325 changes: 129,216 additions & 265,109 deletions data/pango-consensus-sequences_summary.json
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1,305,010 changes: 1,305,010 additions & 0 deletions data/pango-consensus-sequences_summary_new.json
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554 changes: 554 additions & 0 deletions scripts/covariants_json.py
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147 changes: 111 additions & 36 deletions scripts/create_json.py
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464 changes: 464 additions & 0 deletions scripts/nuc_aa_map.py
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