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Issues list

Add Python 3.13 compatibility enhancement New feature or request
#476 opened Nov 6, 2024 by d33bs
FeatureRequest: Automated identification and removal of non-biologically variant features enhancement New feature or request
#452 opened Sep 26, 2024 by hwarden162
1 of 2 tasks
17
Return output filepath str within pycytominer functions enhancement New feature or request
#451 opened Sep 24, 2024 by d33bs
Adding DOI to the code base documentation Improvements or additions to documentation
#449 opened Sep 23, 2024 by axiomcura
6
Increase test coverage for collate enhancement New feature or request
#442 opened Sep 16, 2024 by d33bs
1
SingleCells parameter sqlite_file string results in AttributeError: 'Connection' object has no attribute 'cursor' with updated Pandas versions bug Something isn't working question Further information is requested
#440 opened Sep 16, 2024 by arka2696
1 task done
3
Bump default Python used by CI to next minor version (Python 3.10) dependencies Pull requests that update a dependency file enhancement New feature or request
#434 opened Sep 13, 2024 by d33bs
FeatureRequest: Machine Learning Data Split Functionality enhancement New feature or request
#427 opened Aug 22, 2024 by MikeLippincott
2 tasks done
@MikeLippincott
3
Complete Docker-Sponsored Open Source (DSOS) application process enhancement New feature or request
#399 opened Apr 3, 2024 by d33bs
6 of 7 tasks
2
Isolate tests for Dockerfile builds using Poetry build includes/excludes
#397 opened Apr 3, 2024 by d33bs
[Refactor] Address S108 violations (unsafe /tmp usage) in cyto_utils.collate good first issue Good for newcomers refactor Improve codebase without changing functionality
#394 opened Apr 2, 2024 by kenibrewer
2 tasks
[Refactor] Address S603 violations in pycytominer good first issue Good for newcomers refactor Improve codebase without changing functionality
#393 opened Apr 2, 2024 by kenibrewer
[Refactor] Address S101 violations in cyto_utils good first issue Good for newcomers refactor Improve codebase without changing functionality
#392 opened Apr 2, 2024 by kenibrewer
Align versioning of ruff in pre-commit and dev dependencies using local hooks
#390 opened Apr 1, 2024 by kenibrewer
FeatureRequest: Automatically generated dataframe schemas to catch errors enhancement New feature or request
#384 opened Mar 27, 2024 by kenibrewer
1 of 2 tasks
1
bug: Failing docs build bug Something isn't working documentation Improvements or additions to documentation
#382 opened Mar 24, 2024 by kenibrewer
@kenibrewer
4
Switch to more stable test data path for CellLocations tests
#375 opened Mar 11, 2024 by kenibrewer
5
Bug: Sorting imports reveals circular dependency bug Something isn't working
#372 opened Feb 14, 2024 by kenibrewer
[Enhancement] Create bug report functionality
#365 opened Jan 12, 2024 by gwaybio
2
FeatureRequest: FeatureSet Class for Abstracting Feature columns enhancement New feature or request
#360 opened Dec 12, 2023 by kenibrewer
1 of 2 tasks
1
FeatureRequest: Minimal install and import CI/CD test enhancement New feature or request
#354 opened Nov 7, 2023 by kenibrewer
1 of 2 tasks
FeatureRequest: Commitizen pre-commit hooks enhancement New feature or request
#345 opened Oct 28, 2023 by kenibrewer
1 of 2 tasks
1
Feature Request: Migrate to trusted publishing for PyPi instead of tokens enhancement New feature or request
#344 opened Oct 28, 2023 by kenibrewer
FeatureRequest: Add refactor issue template enhancement New feature or request
#331 opened Oct 26, 2023 by kenibrewer
1 of 2 tasks
@kenibrewer
Doc: How we grant/revoke maintainer status documentation Improvements or additions to documentation
#328 opened Oct 9, 2023 by gwaybio
1
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