Welcome

You made it to the Jupyter Hub for the MOPITAS Autumn School 2025.

Later, you will find Jupyter Notebooks here that we will use during hands-on sessions.

If you choose to work on your own laptop during the hands-on sessions, please follow these steps to prepare for the hands-on sessions:

1. Clone the repository: https://github.com/daisybio/MOPITAS_Autumn_School.git

2. Pull the docker image:

   # 0. Start docker on your machine 
   
   # 1. Pull the pre-built image 
   docker pull ghcr.io/daisybio/mopitas_autumn_school/student-notebook:latest 
   
   # 2. Run the container (Jupyter will be on http://localhost:8888) 
   docker run -it -p 8888:8888 ghcr.io/daisybio/mopitas_autumn_school/student-notebook:latest

3. Download the datasets archive: https://gigamove.rwth-aachen.de/de/download/104c415290f09bb8d61215518eaf8b65 . A password was sent to you via email. Please note that it has ~20GB so plan accordingly!

4. Unzip the datasets: tar -xzf datasets.tar.gz

5. Check the folder structure. It should look like this:

   .
   ├── datasets
   │   ├── Hands_on_1_Spatial_Data
   │   ├── Hands_on_2_LIANA_MistY
   │   ├── Hands_on_3_NiCo
   │   ├── Hands_on_4_Tangram
   │   └── Hands_on_5_Spapros
   └── work
       └── example.ipynb
   

Looking forward to seeing you soon!