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graphclust/graphclust.xml
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<tool id="graphclust" name="GraphClust" version="0.1">
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<description>alignment-free structural clustering of local RNA secondary structures</description>
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+ <requirements>
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+ <requirement type="package">GraphClust</requirement>
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+ <requirement type="package">locarna</requirement>
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+ <requirement type="package">RNAShapes</requirement>
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+ <requirement type="package">cmfinder</requirement>
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+ <requirement type="package">infernal</requirement>
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+ <requirement type="package">rnaz</requirement>
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+ <requirement type="package">vienna_rna</requirement>
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+ </requirements>
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<command>
- perl MASTER_GraphClust.pl
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+ MASTER_GraphClust.pl
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--fasta $input_fasta
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--config $graphclust_config
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--root $output.extra_files_path
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