V0.2 dev

[dillondaudert]

To Do

Functionality

• Allow multiple "views" of dataset at fit/transform time ( UMAP#206, UMAP#601, UMAP docs )
• Support passing precomputed distances
  • As KNNGraph
  • As matrix
• Helper functions to construct fit/transform config

Tests

• config.jl
• utils.jl
• membership_fn.jl
• neighbors.jl
• simplicial_sets.jl
• embeddings.jl
• optimize.jl
• fit.jl
• transform.jl

Docs

• Update README.jl to reflect new API and link to docs
  • Comments on public vs internal API (path to 1.0?)
• UMAPConfig component structs and how to use
• UMAPResult/UMAPTransformResult
• Tutorials for basic vs. advanced usage
• Documenter (?) - we want docs that auto-build, and have some guarantee to be up-to-date...

[codecov]

Codecov Report

❌ Patch coverage is 90.43062% with 40 lines in your changes missing coverage. Please review.
✅ Project coverage is 90.76%. Comparing base (b738d5e) to head (0b8f9b6).
⚠️ Report is 131 commits behind head on master.

Files with missing lines	Patch %	Lines
src/optimize.jl	66.31%	32 Missing ⚠️
src/simplicial_sets.jl	97.36%	4 Missing ⚠️
src/neighbors.jl	91.42%	3 Missing ⚠️
src/utils.jl	96.15%	1 Missing ⚠️

Additional details and impacted files

@@            Coverage Diff             @@
##           master      #55      +/-   ##
==========================================
- Coverage   94.52%   90.76%   -3.77%     
==========================================
  Files           4        9       +5     
  Lines         201      433     +232     
==========================================
+ Hits          190      393     +203     
- Misses         11       40      +29     

☔ View full report in Codecov by Sentry.
📢 Have feedback on the report? Share it here.

🚀 New features to boost your workflow:

• ❄️ Test Analytics: Detect flaky tests, report on failures, and find test suite problems.