Cophenetic correlation plot #101
Description
Hey!
I'd like to know what would be the best approach to use cNMF with bulk RNA-Seq to get the cophenetic correlation plot. I understand we get the usage consensus matrix with shape samples x NMF factors, but the consensus matrix to calculate the cophenetic correlation plot should be of shape samples x samples. How could we retrieve the actual consensus matrix between samples x samples from the outputs? Thanks!