Fix a bug when --key-added is not specified for find-cluster

ebi-gene-expression-group · Aug 30, 2019 · e3ef960 · e3ef960
1 parent c0c5b23
commit e3ef960
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diff --git a/scanpy_scripts/lib/_leiden.py b/scanpy_scripts/lib/_leiden.py
@@ -28,6 +28,8 @@ def leiden(
     if not isinstance(resolution, (list, tuple)):
         if key_added is not None and not key_added.startswith('leiden_'):
             key_added = f'leiden_{key_added}'
+        elif key_added is None:
+            key_added = 'leiden'
         sc.tl.leiden(
             adata,
             resolution=resolution,

diff --git a/scanpy_scripts/lib/_louvain.py b/scanpy_scripts/lib/_louvain.py
@@ -28,6 +28,8 @@ def louvain(
     if not isinstance(resolution, (list, tuple)):
         if key_added is not None and not key_added.startswith('louvain_'):
             key_added = f'louvain_{key_added}'
+        elif key_added is None:
+            key_added = 'louvain'
         sc.tl.louvain(
             adata,
             resolution=resolution,