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@enterovirus-phylo

Enterovirus

A place to store analyses and Nextstrain builds on Enteroviruses. Profile photo from https://www.flickr.com/photos/ajc1/

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  1. evd68-2019 evd68-2019 Public

    Enterovirus D68 analyses on 2019 European samples

  2. echo30-2019 echo30-2019 Public

    Echovirus 30 Nextstrain analyses of 2016-2018 sequences for the 2019 paper

    Python

  3. evd68-archive evd68-archive Public

    Archive of EV-D68 builds in the past, or used in publications

  4. evd68-2022 evd68-2022 Public

    Analysis and sequences from analysis of ENPEN 2021-22 D68 sequences

  5. nextclade_d68 nextclade_d68 Public

    Snakemake pipeline for creating a Nextclade dataset for Enterovirus D68

    Python

  6. dataset-template-inferred-root dataset-template-inferred-root Public template

    Forked from hodcroftlab/dataset-template-inferred-root

    Template for creating a Nextclade Dataset for Enteroviruses

    Python 1

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