v1.4.2

Changed

• Reconciled workflow with wf-template v5.5.0.
• Increasing memory retries for flye deNovo process

Fixed

• makeReport process used to fail with unaligned (u)BAMs as input because unaligned bams were excluded by default by xam_ingress. We fixed this by setting xam_ingress to keep the unaligned files as well.
• bam and bai files from mapping the reads to the reference or draft assembly, depending on mode used, were previously missing from the output directory. They are now included.
• Single sample reports incorrectly displaying 'de novo assembly failed' on successful samples.