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Co-authored-by: James Azam <[email protected]>

R/simulate_infections.R

@@ -5,14 +5,14 @@
 #' model can be specified using the same options as in [estimate_infections()].
 #'
 #' In order to simulate, all parameters that are specified such as the mean and
-#' standard deviatoin of delays or observation scaling, must be fixed.
+#' standard deviation of delays or observation scaling, must be fixed.
 #' Uncertain parameters are not allowed.
 #'
 #' A previous function called [simulate_infections()] that simulates from a
 #' given model fit has been renamed [forecast_infections()].
 #' @param R a data frame of reproduction numbers (column `R`) by date (column
-#'   `date`). R must be numeric and date must be in date format. If any dates
-#'   are missing, it will be assumed that R stays the same
+#'   `date`). Column `R` must be numeric and `date` must be in date format. If any dates
+#'   are missing, it will be assumed that R stays the same.
 #' @param initial_infections numeric; the initial number of infections.
 #' @param day_of_week_effect either `NULL` (no day of the week effect) or a
 #'   numerical vector of length specified in [obs_opts()] as `week_length`