DESCRIPTION

Package: URD
Title: URD
Version: 1.1.1
Authors@R: person("Jeffrey", "Farrell", email = "jeffrey.farrell@nih.gov", role = c("aut", "cre"))
Description: URD reconstructs transcriptional trajectories underlying specification or differentiation processes in the form of a branching tree from single-cell RNAseq data.
Depends: 
	R (>= 3.3.0),
	ggplot2,
	Matrix
Imports:
	caTools,
	data.table,
	destiny,
	diptest,
	gdata,
	ggraph,
	gmodels,
	gplots,
	gridExtra,
	igraph,
	KernSmooth,
	MASS,
	minpack.lm,
	plyr,
	RANN,
	RColorBrewer,
	reshape2,
	ROCR,
	Rtsne,
	scales,
	stats,
	utils
Suggests:
	bit64,
	rgl,
	rhdf5,
	sva
License: GPL-3
Encoding: UTF-8
LazyData: true
RoxygenNote: 7.0.2