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@maartenpaul maartenpaul commented Nov 7, 2025

Draft a first version of the ISCC-SUM tutorial. This tutorial will explain how to use ISCC-SUM in Galaxy and explain the concepts of the ISCC checksums.
https://toolshed.g2.bx.psu.edu/repository?repository_id=9501503161ea7987&changeset_revision=c360847c8299

TODO:

  • add example data
  • Work on a realistic workflow

xref FAIR-imaging/galaxy-image-community#62

>
{: .hands_on}

> <comment-title>Test Data</comment-title>
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For example, can you move this explanation to the "prepare your data" section instead of adding it as a comment?


> <hands-on-title>Generate ISCC codes for input files</hands-on-title>
>
> 1. {% tool [Generate ISCC hash]( https://toolshed.g2.bx.psu.edu/view/imgteam/iscc_sum) %} with the following parameters:
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🚫 [GTN Lint] <GTN:009> reported by reviewdog 🐶
You have used an invalid tool URL, it should be of the form "toolshed.g2.bx.psu.edu/repos/{owner}/{repo}/{tool}/{version}" (or an internal tool ID) so, please double check.

Suggested change
> 1. {% tool [Generate ISCC hash]( https://toolshed.g2.bx.psu.edu/view/imgteam/iscc_sum) %} with the following parameters:
> 1. {% tool [Generate ISCC hash]( https://toolshed.g2.bx.psu.edu/view/imgteam/iscc_sum) %} with the following parameters:


> <hands-on-title>Compare two files for similarity</hands-on-title>
>
> 1. {% tool [Compare ISCC hash similarity]( https://toolshed.g2.bx.psu.edu/view/imgteam/iscc_sum_compare) %} with the following parameters:
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🚫 [GTN Lint] <GTN:009> reported by reviewdog 🐶
You have used an invalid tool URL, it should be of the form "toolshed.g2.bx.psu.edu/repos/{owner}/{repo}/{tool}/{version}" (or an internal tool ID) so, please double check.

Suggested change
> 1. {% tool [Compare ISCC hash similarity]( https://toolshed.g2.bx.psu.edu/view/imgteam/iscc_sum_compare) %} with the following parameters:
> 1. {% tool [Compare ISCC hash similarity]( https://toolshed.g2.bx.psu.edu/view/imgteam/iscc_sum_compare) %} with the following parameters:

>
> {% snippet faqs/galaxy/collections_build_list.md %}
>
> 2. {% tool [Compare ISCC hash similarity]( https://toolshed.g2.bx.psu.edu/view/imgteam/iscc_sum_compare/iscc_sum_compare) %} with the following parameters:
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🚫 [GTN Lint] <GTN:009> reported by reviewdog 🐶
You have used an invalid tool URL, it should be of the form "toolshed.g2.bx.psu.edu/repos/{owner}/{repo}/{tool}/{version}" (or an internal tool ID) so, please double check.

Suggested change
> 2. {% tool [Compare ISCC hash similarity]( https://toolshed.g2.bx.psu.edu/view/imgteam/iscc_sum_compare/iscc_sum_compare) %} with the following parameters:
> 2. {% tool [Compare ISCC hash similarity]( https://toolshed.g2.bx.psu.edu/view/imgteam/iscc_sum_compare/iscc_sum_compare) %} with the following parameters:


> <hands-on-title>Verify a file against its ISCC code</hands-on-title>
>
> 1. {% tool [Verify ISCC hash](toolshed.g2.bx.psu.edu/repos/bgruening/iscc_sum_verify/iscc_sum_verify) %} with the following parameters:
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🚫 [GTN Lint] <GTN:009> reported by reviewdog 🐶
This tool identifier looks incorrect, it doesn't have the right number of segments.

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