Skip to content

Conversation

@paulocilasjr
Copy link
Contributor

  • Prepare dataset: Upload the images ZIP and metadata CSV, confirm datatypes, and tag them for clarity before running any tools.
  • Set and run the tool: Configure Image Learner with the specified model and split settings, then launch training.
  • Read the report: Use the HTML report tabs to review configuration, training curves, and test diagnostics.
  • Evaluate it: Focus on the test metrics to judge performance and compare to the benchmark.

Copy link
Member

@shiltemann shiltemann left a comment

Choose a reason for hiding this comment

The reason will be displayed to describe this comment to others. Learn more.

Thanks a lot @paulocilasjr! A quick technical review here, I will let others review the scientific content 👍

Copy link
Member

Choose a reason for hiding this comment

The reason will be displayed to describe this comment to others. Learn more.

please remove this file. If you have a need for simple version of the tutorials, please create an issue and we can look into doing this automatically GTN-wide (e.g. we do this for slides already)

Copy link
Contributor Author

Choose a reason for hiding this comment

The reason will be displayed to describe this comment to others. Learn more.

Removed. No need for a simple version.

> and [Cancer-Galaxy](https://cancer.usegalaxy.org)
> Galaxy Learning and Modeling tools > Image Learner
>
{: .comment}
Copy link
Member

Choose a reason for hiding this comment

The reason will be displayed to describe this comment to others. Learn more.

We have an automated dropdown with "available on these Galaxies" that automatically determines which Galaxy servers somebody can perform a tutorial on, so this comment box is not necessary

Copy link
Contributor Author

Choose a reason for hiding this comment

The reason will be displayed to describe this comment to others. Learn more.

Thank you! Good thing to know.

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment

Projects

None yet

Development

Successfully merging this pull request may close these issues.

2 participants