Modify annotations to support model predictions #4086
Workflow file for this run
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| name: Resolwe CI | |
| on: | |
| push: | |
| branches: | |
| - master | |
| tags: | |
| - "[0-9]+.[0-9]+.[0-9]+*" | |
| pull_request: | |
| schedule: | |
| - cron: "30 2 * * *" | |
| concurrency: | |
| group: ${{ github.workflow }}-${{ github.head_ref || github.ref_name }} | |
| cancel-in-progress: true | |
| jobs: | |
| test: | |
| env: | |
| RESOLWE_COMMUNICATOR_IMAGE: "resolwe/com:testing" | |
| runs-on: arc-runner | |
| timeout-minutes: 20 | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| include: | |
| - toxenv: "py311" | |
| description: "Unit tests (Python 3.11)" | |
| - toxenv: "py312" | |
| description: "Unit tests (Python 3.12)" | |
| - toxenv: "linters" | |
| description: "Linters (Python 3.12)" | |
| - toxenv: "packaging" | |
| description: "Packaging (Python 3.12)" | |
| - toxenv: "migrations" | |
| description: "Migrations (Python 3.12)" | |
| name: ${{ matrix.description }} | |
| services: | |
| postgres: | |
| image: public.ecr.aws/docker/library/postgres:16 | |
| ports: | |
| - 55432:5432 | |
| env: | |
| POSTGRES_USER: resolwe | |
| POSTGRES_DB: resolwe | |
| POSTGRES_PASSWORD: resolwe | |
| options: >- | |
| --health-cmd pg_isready | |
| --health-interval 10s | |
| --health-timeout 5s | |
| --health-retries 5 | |
| redis: | |
| image: public.ecr.aws/docker/library/redis:7-alpine | |
| ports: | |
| - 56379:6379 | |
| options: >- | |
| --health-cmd "redis-cli ping" | |
| --health-interval 10s | |
| --health-timeout 5s | |
| --health-retries 5 | |
| steps: | |
| - name: Checkout | |
| uses: actions/checkout@v4 | |
| - name: Build communication container | |
| if: matrix.toxenv == 'py311' || matrix.toxenv == 'py312' | |
| working-directory: ./resolwe/flow/docker_images | |
| run: docker build -f Dockerfile.communication -t ${{ env.RESOLWE_COMMUNICATOR_IMAGE }} ../../ | |
| - name: ${{ matrix.description }} | |
| env: | |
| GITHUB_ACTIONS_DEBUG: ${{ runner.debug || false }} | |
| run: | | |
| tox -e ${{ matrix.toxenv }} | |
| build: | |
| runs-on: arc-runner | |
| needs: test | |
| if: startsWith(github.ref, 'refs/tags') | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - name: Install build | |
| run: python3.12 -m pip install --user build | |
| - name: Build a binary wheel and a source tarball | |
| run: python3.12 -m build --sdist --wheel --outdir dist/ . | |
| - name: Publish distribution to PyPI | |
| uses: pypa/gh-action-pypi-publish@release/v1 | |
| with: | |
| password: ${{ secrets.pypi_password }} | |
| - name: Upload coverage to Codecov | |
| uses: codecov/codecov-action@v4 | |
| with: | |
| file: .coverage | |
| token: ${{ secrets.CODECOV_TOKEN }} |