Remove clearDeps function

[daniel-noland]

clearDeps is a bit of a bug factory as it turns out.

It is not necessary anyway; all it does is shrink the development containers a bit, which we can very much live without.

[daniel-noland]

closing in favor of #77

[github-actions]

Outdated packages (gnu64):

priority	nix_package	version_local	version_nixpkgs	version_upstream
13	glibc	2.40-36	2.40-36	2.41
11	llvm	19.1.6	17.0.6	19.1.7
11	llvm	19.1.6	19.1.6	19.1.7
11	mimalloc	2.1.8	2.1.8	3.0.1
11	binutils	2.43.1	2.43.1	2.44
10	isl	0.20	0.24	0.27
10	compiler-rt-libc	19.1.6	19.1.6
10	coreutils	9.5	9.5	9.6
7	openssl	3.3.2	1.1.1w	3.4.0
7	openssl	3.3.2	3.3.2	3.4.0
6	libxcrypt	4.4.36	4.4.36	4.4.38
5	perl	5.40.0	5.40.0	5.40.1
5	xz	5.6.3	5.6.3	5.6.4
5	ncurses	6.4.20221231	6.4.20221231	6.5
4	tzdata	2024b	2024b	2025a
4	numactl	2.0.18	2.0.18	2.0.19
4	sqlite	3.47.2	3.47.2	3.48.0
4	kmod	31	31	33
2	dpdk	24.11.1	24.07	24.11.1

[github-actions]

Vulnerable packages (gnu64):

vuln_id	url	package	severity	version_local	version_nixpkgs	version_upstream	package_repology	sortcol	classify
CVE-2024-13176	https://nvd.nist.gov/vuln/detail/CVE-2024-13176	openssl	4.1	3.3.2	3.3.2	3.4.0	openssl	2024A0000013176	err_not_vulnerable_based_on_repology
CVE-2024-9143	https://nvd.nist.gov/vuln/detail/CVE-2024-9143	openssl	4.3	3.3.2	3.3.2	3.4.0	openssl	2024A0000009143	err_not_vulnerable_based_on_repology
OSV-2024-1209	https://osv.dev/OSV-2024-1209	libxml2		2.13.5	2.13.5	2.13.5	libxml2	2024A0000001209	err_not_vulnerable_based_on_repology
OSV-2024-817	https://osv.dev/OSV-2024-817	libpcap		1.10.5	1.10.5	1.10.5	libpcap	2024A0000000817	err_not_vulnerable_based_on_repology
OSV-2024-395	https://osv.dev/OSV-2024-395	libpcap		1.10.5	1.10.5	1.10.5	libpcap	2024A0000000395	err_not_vulnerable_based_on_repology
OSV-2023-1307	https://osv.dev/OSV-2023-1307	libbpf		1.5.0	1.5.0	1.5.0	libbpf	2023A0000001307	err_not_vulnerable_based_on_repology
OSV-2023-877	https://osv.dev/OSV-2023-877	libbpf		1.5.0	1.5.0	1.5.0	libbpf	2023A0000000877	err_not_vulnerable_based_on_repology
MAL-2022-6425	https://osv.dev/MAL-2022-6425	tbb		2021.11.0				2022A0000006425	err_missing_repology_version
MAL-2022-4301	https://osv.dev/MAL-2022-4301	libidn2		2.3.7	2.3.7	2.3.7	libidn2	2022A0000004301	err_not_vulnerable_based_on_repology
OSV-2021-777	https://osv.dev/OSV-2021-777	libxml2		2.13.5	2.13.5	2.13.5	libxml2	2021A0000000777	err_not_vulnerable_based_on_repology
RUSTSEC-2019-0006	https://osv.dev/RUSTSEC-2019-0006	ncurses		6.4.20221231	6.4.20221231	6.5	ncurses	2019A0000000006	err_not_vulnerable_based_on_repology
CVE-2016-2781	https://nvd.nist.gov/vuln/detail/CVE-2016-2781	coreutils	6.5	9.5	9.5	9.6	coreutils	2016A0000002781	fix_not_available