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  1. pypage pypage Public

    python implementation of the PAGE algorithm

    Python 17 3

  2. SwitchFinder SwitchFinder Public

    Python 17 1

  3. pyteiser pyteiser Public

    Python implementation of TEISER also capable of using SHAPE structural probing data

    Python 12 9

  4. Ribolog Ribolog Public

    A suite of regression-based tools for ribosome profiling data analysis

    Jupyter Notebook 9 1

  5. APAlog APAlog Public

    A tool for quantification of alternative poly A usage

    R 5 1

  6. cdsFM cdsFM Public

    cdsFM: Repository of Codon-based Foundation Models

    Python 5

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