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Format files to prepare for pypi publish #10

Merged
merged 25 commits into from
Jul 9, 2020
Merged

Format files to prepare for pypi publish #10

merged 25 commits into from
Jul 9, 2020

Commits on Jun 30, 2020

  1. update readme to use full links to prepare for pypi depolyment

    @ajlee21
    ajlee21 committed Jun 30, 2020
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  2. update setup file

    @ajlee21
    ajlee21 committed Jun 30, 2020
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Commits on Jul 1, 2020

  1. add nb to exclude for linter testing

    @ajlee21
    ajlee21 committed Jul 1, 2020
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Commits on Jul 2, 2020

  1. Merge remote-tracking branch 'upstream/master' into pypi

    @ajlee21
    ajlee21 committed Jul 2, 2020
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  2. remove random import from files

    @ajlee21
    ajlee21 committed Jul 2, 2020
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Commits on Jul 3, 2020

  1. remove files for pytesting analysis, moved to simulate-expression-com… 

    …pendia
    @ajlee21
    ajlee21 committed Jul 3, 2020
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  2. pull out functions associated with analysis and move to simulate-expr… 

    …ession-compendia repo
    @ajlee21
    ajlee21 committed Jul 3, 2020
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  3. add files related to vae and simulating data

    @ajlee21
    ajlee21 committed Jul 3, 2020
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  4. update setup based on new scripts

    @ajlee21
    ajlee21 committed Jul 3, 2020
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  5. update names to be more descriptive

    @ajlee21
    ajlee21 committed Jul 3, 2020
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  6. update scripts to output files for testing

    @ajlee21
    ajlee21 committed Jul 3, 2020
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  7. add test files

    @ajlee21
    ajlee21 committed Jul 3, 2020
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  8. add pytest workflow

    @ajlee21
    ajlee21 committed Jul 3, 2020
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  9. fix name typo

    @ajlee21
    ajlee21 committed Jul 3, 2020
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Commits on Jul 6, 2020

  1. add comments to simulate_expression_data.py

    @ajlee21
    ajlee21 committed Jul 6, 2020
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  2. update test nbs

    @ajlee21
    ajlee21 committed Jul 6, 2020
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  3. update readme based on refactor

    @ajlee21
    ajlee21 committed Jul 6, 2020
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  4. fix typo in config

    @ajlee21
    ajlee21 committed Jul 6, 2020
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  5. fix another params typo

    @ajlee21
    ajlee21 committed Jul 6, 2020
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Commits on Jul 7, 2020

  1. update files based on PR comments

    @ajlee21
    ajlee21 committed Jul 7, 2020
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  2. remove periods

    @ajlee21
    ajlee21 committed Jul 7, 2020
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Commits on Jul 8, 2020

  1. update files based on PR comments

    @ajlee21
    ajlee21 committed Jul 8, 2020
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  2. fix typo for import random

    @ajlee21
    ajlee21 committed Jul 8, 2020
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  3. add back nbval with out lax

    @ajlee21
    ajlee21 committed Jul 8, 2020
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  4. add check for vae reproducibility

    @ajlee21
    ajlee21 committed Jul 8, 2020
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