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[Bug] Comseg with Vizgen Merscope Prior Error

Status: Open.

#346 In gustaveroussy/sopa;

· PietroD opened on Nov 3, 2025

[Bug] sdata.write("file.zarr") - returns JSON error (CosMx data)

Status: Open.

#345 In gustaveroussy/sopa;

· sam-mick opened on Oct 30, 2025

[Feature] Nightly CI runs

good first issueGood for newcomersGood for newcomers

Status: Open.

Feature

#342 In gustaveroussy/sopa;

· quentinblampey opened on Oct 28, 2025

[Feature] Ping PyPI before running the Docker step in the actions

good first issueGood for newcomersGood for newcomers

Status: Open.

Feature

#341 In gustaveroussy/sopa;

· quentinblampey opened on Oct 28, 2025

boxy segmentation mask

Status: Open.

#340 In gustaveroussy/sopa;

· nalinratnayeke opened on Oct 24, 2025

[Feature] Singular g4x support

Status: Open.

#339 In gustaveroussy/sopa;

· derrik-gratz opened on Oct 20, 2025

[Feature] Nimbus model support

Status: Open.

#337 In gustaveroussy/sopa;

· Mr-Milk opened on Oct 13, 2025

spatial operation analysis for visium hd compatible?

Status: Open.

#334 In gustaveroussy/sopa;

· KunHHE opened on Oct 10, 2025

Tangram cell type annotation

Status: Open.

#332 In gustaveroussy/sopa;

· Sophielsn opened on Oct 6, 2025

Can sopa take as input COMET data ?

Status: Open.

#331 In gustaveroussy/sopa;

· reJELIN opened on Oct 6, 2025

[Feature] Add counting complementary genes

Status: Open.

#329 In gustaveroussy/sopa;

· quentinblampey opened on Oct 2, 2025

read VisiumHD data without feature slice file?

Status: Open.

#319 In gustaveroussy/sopa;

· LauritzMia opened on Sep 16, 2025