Stage release 1.2.0

.github/workflows/deploy-alpha.yml

@@ -10,10 +10,10 @@ jobs:
     runs-on: ubuntu-latest    
     steps:
       - uses: actions/checkout@v5
-      - name: set up python  3.12
+      - name: set up python  3.14
         uses: actions/setup-python@v6
         with: 
-          python-version: 3.12
+          python-version: 3.14
       - run: pip install . montepy[develop]
       - run: python -m pytest
 
@@ -31,10 +31,10 @@ jobs:
         with:
           fetch-depth: 0
           fetch-tags: true
-      - name: set up python  3.12
+      - name: set up python  3.14
         uses: actions/setup-python@v6
         with: 
-          python-version: 3.12
+          python-version: 3.14
       - run: pip install . montepy[build]
       - name: Get Version
         id: get_version
@@ -43,7 +43,7 @@ jobs:
         run: .github/scripts/check_version.py --alpha 
       - run: python -m build .
       - name: Sign the dists with Sigstore
-        uses: sigstore/gh-action-sigstore-python@f909491f27c345faa936da468c9ddfac57cbeb49
+        uses: sigstore/gh-action-sigstore-python@27dac9cce16c9883a0d4b51c9e0a520102d68016
         with:
           inputs: >-
             ./dist/*.tar.gz
@@ -58,7 +58,7 @@ jobs:
           gh release upload
           'v${{ steps.get_version.outputs.version }}' dist/**
           --repo '${{ github.repository }}'
-      - uses: actions/upload-artifact@v4
+      - uses: actions/upload-artifact@v5
         with: 
            name: build
            path: |
@@ -76,7 +76,7 @@ jobs:
       id-token: write
     runs-on: ubuntu-latest
     steps:
-      - uses: actions/download-artifact@v5
+      - uses: actions/download-artifact@v6
         with:
           name: build
           path: dist/
@@ -95,13 +95,10 @@ jobs:
       id-token: write
     runs-on: ubuntu-latest
     steps:
-      - uses: actions/download-artifact@v5
+      - uses: actions/download-artifact@v6
         with:
           name: build
           path: dist/
       - name: Publish distribution 📦 to PyPI
         uses: pypa/gh-action-pypi-publish@ed0c53931b1dc9bd32cbe73a98c7f6766f8a527e
 
-
-
-

.github/workflows/deploy.yml

@@ -10,10 +10,10 @@ jobs:
     runs-on: ubuntu-latest    
     steps:
       - uses: actions/checkout@v5
-      - name: set up python  3.12
+      - name: set up python  3.14
         uses: actions/setup-python@v6
         with: 
-          python-version: 3.12
+          python-version: 3.14
       - run: pip install . montepy[develop]
       - run: python -m pytest
 
@@ -32,10 +32,10 @@ jobs:
         with:
           fetch-depth: 0
           fetch-tags: true
-      - name: set up python  3.12
+      - name: set up python  3.14
         uses: actions/setup-python@v6
         with: 
-          python-version: 3.12
+          python-version: 3.14
       - run: pip install . montepy[build]
       - name: Get Version
         id: get_version
@@ -44,7 +44,7 @@ jobs:
         run: .github/scripts/check_version.py
       - run: python -m build .
       - name: Sign the dists with Sigstore
-        uses: sigstore/gh-action-sigstore-python@f909491f27c345faa936da468c9ddfac57cbeb49
+        uses: sigstore/gh-action-sigstore-python@27dac9cce16c9883a0d4b51c9e0a520102d68016
         with:
           inputs: >-
             ./dist/*.tar.gz
@@ -59,7 +59,7 @@ jobs:
           gh release upload
           'v${{ steps.get_version.outputs.version }}' dist/**
           --repo '${{ github.repository }}'
-      - uses: actions/upload-artifact@v4
+      - uses: actions/upload-artifact@v5
         with: 
            name: build
            path: |
@@ -78,7 +78,7 @@ jobs:
       id-token: write
     runs-on: ubuntu-latest
     steps:
-      - uses: actions/download-artifact@v5
+      - uses: actions/download-artifact@v6
         with:
           name: build
           path: dist/
@@ -97,7 +97,7 @@ jobs:
       id-token: write
     runs-on: ubuntu-latest
     steps:
-      - uses: actions/download-artifact@v5
+      - uses: actions/download-artifact@v6
         with:
           name: build
           path: dist/

.github/workflows/main.yml

@@ -2,16 +2,16 @@ name: CI testing
 
 on: 
   pull_request:
-    branches: [develop, alpha-test-dev, alpha-test]
+    branches: [develop, alpha-test-dev, alpha-test, minor-rel-dev]
   push: 
-     branches: [develop, main, alpha-test]
+     branches: [develop, main, alpha-test, minor-rel-dev]
 
 jobs:
   build:
     runs-on: ubuntu-latest
     strategy:
       matrix:
-        python-version: ["3.9", "3.10", "3.11", "3.12", "3.13"]
+        python-version: ["3.12", "3.13", "3.14"]
 
     steps:
       - uses: actions/checkout@v5
@@ -42,8 +42,8 @@ jobs:
       - run: pip install --user . montepy[develop]
       - run: pip freeze
       - name: Upload build artifacts
-        uses: actions/upload-artifact@v4
-        if: ${{ matrix.python-version == '3.12'}}
+        uses: actions/upload-artifact@v5
+        if: ${{ matrix.python-version == '3.13'}}
         with: 
            name: build
            path: dist/*
@@ -54,12 +54,12 @@ jobs:
       actions: write
     strategy:
       matrix:
-        python-version: ["3.9", "3.10", "3.11", "3.12", "3.13"]
-        numpy-version: ["1.0", "2.0"]
+        python-version: ["3.12", "3.13", "3.14"]
+        numpy-version: ["2.0", "2.3"]
         sly-version: ["0.5"]
         include:
-          - python-version: "3.11"
-            numpy-version: "2.0"
+          - python-version: "3.13"
+            numpy-version: "2.3"
             sly-version: "0.4"
 
     steps:
@@ -83,19 +83,19 @@ jobs:
       - run: coverage xml
         if:  ${{ success() || failure() }}
       - name: Upload test report
-        if: ${{ matrix.python-version == '3.12' && matrix.numpy-version == '2.0' && (success() || failure() )}}
-        uses: actions/upload-artifact@v4
+        if: ${{ matrix.python-version == '3.14' && matrix.numpy-version == '2.3' && (success() || failure() )}}
+        uses: actions/upload-artifact@v5
         with:
           name: test
           path: test_report.xml
       - name: Upload coverage report
-        if: ${{ matrix.python-version == '3.12' && matrix.numpy-version == '2.0' && (success() || failure() )}}
-        uses: actions/upload-artifact@v4
+        if: ${{ matrix.python-version == '3.14' && matrix.numpy-version == '2.3' && (success() || failure() )}}
+        uses: actions/upload-artifact@v5
         with:
           name: coverage
           path: coverage.xml
       - name: Coveralls GitHub Action
-        if: ${{ matrix.python-version == '3.12' && matrix.numpy-version == '2.0' && (success() || failure() )}}
+        if: ${{ matrix.python-version == '3.14' && matrix.numpy-version == '2.3' && (success() || failure() )}}
         uses: coverallsapp/github-action@648a8eb78e6d50909eff900e4ec85cab4524a45b
         with:
           file: coverage.xml
@@ -116,18 +116,14 @@ jobs:
       - name: set up python 3.12
         uses: actions/setup-python@v6
         with: 
-          python-version: 3.12
+          python-version: 3.14
       - run: pip install . montepy[doc,build]
-      - run: sphinx-build doc/source/ doc/build/html -W --keep-going -E
+      - run: cd doc && make html SPHINXOPTS="-W --keep-going -E"
         name: Build site strictly
-      - uses: actions/upload-artifact@v4
+      - uses: actions/upload-artifact@v5
         with:
           name: website
           path: doc/build
-      - name: Test for missing API documentation  
-        run: | 
-             cd doc/source
-             python _test_for_missing_docs.py  
       - name: Test for broken hyperlinks
         run: |
              cd doc
@@ -141,10 +137,10 @@ jobs:
         with:
           fetch-depth: 0
           fetch-tags: true
-      - name: set up python 3.12
+      - name: set up python 3.14
         uses: actions/setup-python@v6
         with: 
-          python-version: 3.12
+          python-version: 3.14
       - run: pip install . montepy[doc,build,demo-test,test]
       - run: python -m phmutest README.md --replmode --log
         name: Test readme code
@@ -161,11 +157,12 @@ jobs:
     runs-on: ubuntu-latest
 
     steps:
+
       - uses: actions/checkout@v5
-      - name: set up python 3.12
+      - name: set up python 3.14
         uses: actions/setup-python@v6
         with: 
-          python-version: 3.12
+          python-version: 3.14
       - run: pip install . montepy[format]
       - run: black --check montepy/ tests/
 
@@ -174,10 +171,10 @@ jobs:
 
     steps:
       - uses: actions/checkout@v5
-      - name: set up python 3.12
+      - name: set up python 3.14
         uses: actions/setup-python@v6
         with: 
-          python-version: 3.12
+          python-version: 3.14
       - run: pip install . montepy[test]
       - run: pytest --profile
         name: Profile test suite
@@ -191,10 +188,10 @@ jobs:
 
     steps:
       - uses: actions/checkout@v5
-      - name: set up python 3.12
+      - name: set up python 3.14
         uses: actions/setup-python@v6
         with: 
-          python-version: 3.12
+          python-version: 3.14
       - run: pip install . montepy[test]
       - run: python benchmark/benchmark_big_model.py  
         name: Benchmark against big model

.gitignore

@@ -1,6 +1,10 @@
 __pycache__/
 build/*
 doc/build
+doc/source/api/generated
+doc/source/.cache
+doc/source/_contents
+doc/_output
 dist/*
 *egg-info/*
 *.mcnp
@@ -11,13 +15,17 @@ htmlcov
 .idea/*
 *.*.sw*
 *.prof
+*.whl
+*.tar.gz
 doc/build/*
 .coverage
 .hypothesis/
 .idea/
 .venv/
 .ipynb_checkpoints/
 montepy/_version.py
+.vscode/
+.jupyterlite.doit.db
 
 # various testing results
 htmlcov

.readthedocs.yaml

@@ -14,11 +14,15 @@ build:
       - git fetch --unshallow || true
       - git config remote.origin.fetch '+refs/heads/*:refs/remotes/origin/*' || true
       - git fetch --all --tags || true
+    pre_build:
+      # ensure that all builds have necessary jupyterlite files
+      - cd doc && make html
+      - mkdir -p $READTHEDOCS_OUTPUT/html 
+      - cp -r doc/build/html/* "$READTHEDOCS_OUTPUT/html" 
 
 # Build documentation in the "docs/" directory with Sphinx
 sphinx:
   configuration: doc/source/conf.py
-  fail_on_warning: true
 
 # Optionally build your docs in additional formats such as PDF and ePub
 formats:

README.md

@@ -15,6 +15,7 @@
 [![PyPI version](https://badge.fury.io/py/montepy.svg)](https://badge.fury.io/py/montepy)
 [![Conda Version](https://img.shields.io/conda/vn/conda-forge/montepy.svg)](https://anaconda.org/conda-forge/montepy)
 [![PyPI pyversions](https://img.shields.io/pypi/pyversions/montepy.svg)](https://pypi.org/project/montepy/)
+[![SPEC 0 — Minimum Supported Dependencies](https://img.shields.io/badge/SPEC-0-green?labelColor=%23004811&color=%235CA038)](https://scientific-python.org/specs/spec-0000/)
 
 [![DOI](https://zenodo.org/badge/DOI/10.5281/zenodo.15185506.svg)](https://doi.org/10.5281/zenodo.15185506)
 

demo/0_IntroToMontePy.ipynb

@@ -228,6 +228,10 @@
    },
    "outputs": [],
    "source": [
+    "#note this install_montepy is only necessary for jupyterlite; You don't need to use it locally\n",
+    "from _config import install_montepy\n",
+    "install_montepy()\n",
+    "\n",
     "import montepy\n",
     "\n",
     "problem = montepy.read_input(\"models/pin_cell.imcnp\")\n",
@@ -424,6 +428,8 @@
    },
    "outputs": [],
    "source": [
+    "#note this %pip is only needed for running in jupyterlite online\n",
+    "%pip install ipython\n",
     "from _config import IFrame\n",
     "\n",
     "IFrame(\"https://www.montepy.org/en/stable/\")"
@@ -772,7 +778,7 @@
    "name": "python",
    "nbconvert_exporter": "python",
    "pygments_lexer": "ipython3",
-   "version": "3.13.2"
+   "version": "3.13.5"
   },
   "rise": {
    "scroll": true,

demo/1_PinCellCorrection_inter.ipynb

@@ -46,7 +46,8 @@
    },
    "outputs": [],
    "source": [
-    "!cat models/pin_cell.imcnp"
+    "with open(\"models/pin_cell.imcnp\") as fh:\n",
+    "    print(fh.read())"
    ]
   },
   {
@@ -120,6 +121,10 @@
    },
    "outputs": [],
    "source": [
+    "#note this install_montepy is only necessary for jupyterlite; You don't need to use it locally\n",
+    "from _config import install_montepy\n",
+    "install_montepy()\n",
+    "\n",
     "# actually needed\n",
     "import montepy\n",
     "import numpy as np\n",
@@ -1360,7 +1365,7 @@
    "name": "python",
    "nbconvert_exporter": "python",
    "pygments_lexer": "ipython3",
-   "version": "3.13.2"
+   "version": "3.13.5"
   },
   "rise": {
    "scroll": true,