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Achievements

Achievement: Pull Sharkx2Achievement: YOLOAchievement: Arctic Code Vault ContributorAchievement: Starstruck

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  1. morrislab/pairtree morrislab/pairtree Public

    Pairtree is a method for reconstructing cancer evolutionary history in individual patients, and analyzing intratumor genetic heterogeneity. Pairtree focuses on scaling to many more cancer samples a…

    Python 37 11

  2. kablammo kablammo Public

    Interactive, web-based BLAST results visualization tool. Accessible at https://kablammo.wasmuthlab.org.

    JavaScript 66 11

  3. morrislab/pearsim morrislab/pearsim Public

    Framework for generating simulated data with which to evaluate cancer evolutionary history reconstruction methods. Suitable for use with Pairtree, SubMARine, and other methods.

    Python 1

  4. morrislab/consensus-bp morrislab/consensus-bp Public

    Pipeline for creating consensus copy-number aberration (CNA) segmentation (breakpoints) for ICGC Pan Cancer Analysis of Whole Genomes project. Used in paper at https://www.biorxiv.org/content/10.11…

    Python 2

  5. morrislab/cns-ball-discordance morrislab/cns-ball-discordance Public

    Pipeline for using Pairtree to compare subclone distributions in acute lymphoblastic leukemias between CNS and bone marrow samples. Paper forthcoming.

    Python

  6. morrislab/crc-dtp-ith-analysis morrislab/crc-dtp-ith-analysis Public

    Pipeline for evaluating intratumor genetic heterogeneity in colorectal cancer patients. Used in paper at https://www.cell.com/cell/fulltext/S0092-8674(20)31535-X.

    Shell