feat: SJIP-569 filter to keep only available biospecimen for request …

…report
kids-first · Oct 18, 2023 · a3401d0 · a3401d0
1 parent 47fa750
commit a3401d0
Showing 1 changed file with 3 additions and 1 deletion.
diff --git a/src/reports/biospecimen-request/generateBiospecimenRequestFiles.ts b/src/reports/biospecimen-request/generateBiospecimenRequestFiles.ts
@@ -12,6 +12,7 @@ import { contact, generateStudyTab, wantedFields } from './config';
 import { resolveSetsInSqon } from '../../utils/sqonUtils';
 import { SheetConfig } from '../types';
 import generateTxtFile from '../utils/generateTxtFile';
+import { addConditionAvailableInSqon } from '../utils/getAvailableBiospecimensFromSqon';
 
 /**
  * Generate and write locally.
@@ -102,7 +103,8 @@ const makeReportQuery = async (
 ) => {
     const nestedFields = getNestedFields(extendedConfig);
     const newSqon = await resolveSetsInSqon(sqon, userId, accessToken);
-    const query = buildQuery({ nestedFields, filters: newSqon });
+    const newSqonForAvailableOnly = addConditionAvailableInSqon(newSqon);
+    const query = buildQuery({ nestedFields, filters: newSqonForAvailableOnly });
 
     return {
         query,