Fix undefined contig length in workflows #47
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| name: Build and upload to PyPI | |
| # With the current configuration, the workflow (except PyPI upload) | |
| # will run on every pull request and on every push to dev branch. | |
| # This way we can track if some changes break the wheel builds. | |
| # | |
| # The PyPI publishing job will only run on release events. | |
| on: | |
| workflow_dispatch: # This allows manual triggering of the workflow for testing on test.pypi.org | |
| inputs: | |
| publish_test: | |
| description: "Publish on test.pypi.org" | |
| required: false | |
| default: false | |
| publish_to_pypi: | |
| description: "Publish on pypi.org. Use with caution!" | |
| required: false | |
| default: false | |
| pull_request: | |
| push: | |
| branches: | |
| - dev | |
| release: | |
| types: | |
| - released # Run only on release events, use 'published' to run on draft or pre-release | |
| jobs: | |
| build_wheels: | |
| name: Build wheels on ${{ matrix.os }} | |
| runs-on: ${{ matrix.os }} | |
| strategy: | |
| matrix: | |
| # macos-13 is an Intel runner, macos-14 is an Apple Silicon runner | |
| # Should we support Linux ARM? If so, add 'ubuntu-24.04-arm' | |
| os: [ubuntu-latest, macos-13, macos-14, ubuntu-24.04-arm] | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - name: Build wheels | |
| uses: pypa/[email protected] | |
| # We skip: | |
| # - 32-bit builds | |
| # - PyPy builds (check if ppanggolin works on PyPy first) | |
| env: | |
| CIBW_SKIP: "*_i686 pp*" | |
| - uses: actions/upload-artifact@v4 | |
| with: | |
| name: cibw-wheels-${{ matrix.os }}-${{ strategy.job-index }} | |
| path: ./wheelhouse/*.whl | |
| build_sdist: | |
| name: Build source distribution | |
| runs-on: ubuntu-latest | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - name: Build sdist | |
| run: pipx run build --sdist | |
| - uses: actions/upload-artifact@v4 | |
| with: | |
| name: cibw-sdist | |
| path: dist/*.tar.gz | |
| upload_pypi: | |
| needs: [build_wheels, build_sdist] | |
| runs-on: ubuntu-latest | |
| environment: pypi | |
| permissions: | |
| id-token: write | |
| # Publish on PyPI only on release events | |
| if: (github.event_name == 'release' && github.event.action == 'released') || (github.event_name == 'workflow_dispatch' && (inputs.publish_test == 'true' || inputs.publish_to_pypi == 'true')) | |
| steps: | |
| - uses: actions/download-artifact@v4 | |
| with: | |
| pattern: cibw-* | |
| path: dist | |
| merge-multiple: true | |
| - name: Publish to PyPI | |
| if: (github.event_name == 'release' && github.event.action == 'released') || (github.event_name == 'workflow_dispatch' && inputs.publish_to_pypi == 'true') | |
| uses: pypa/gh-action-pypi-publish@release/v1 | |
| - name: Publish to test.pypi.org | |
| if: github.event_name == 'workflow_dispatch' && inputs.publish_test == 'true' | |
| uses: pypa/gh-action-pypi-publish@release/v1 | |
| with: | |
| repository-url: https://test.pypi.org/legacy/ |