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Make config post-able

Status: Open.

#90 In lbl-cbg/t5-commons;

· ajtritt opened on Jul 17, 2025

Remove any and all mentions and uses of tags in JAMO

Status: Open.

#89 In lbl-cbg/t5-commons;

· ajtritt opened on Jul 17, 2025

Consistent use of identifiers and annotation

Status: Open.

#81 In lbl-cbg/t5-commons;

· ajtritt opened on Jun 17, 2025

Support pre-selected protein in PRP by URL

protein request portal

Status: Open.

#72 In lbl-cbg/t5-commons;

· rly opened on Jun 12, 2025

Fixes to the alphafold automation to get the results available in the genome browser

jamoJamo modification and deploymentJamo modification and deployment

jira therapeudicssetup of therapeudics pipeline in jirasetup of therapeudics pipeline in jira

Status: Open.

#71 In lbl-cbg/t5-commons;

· sspoon opened on May 21, 2025

· 

Y2/Q2 - Apr-Jun, 2025

Get solubility script running as part of pre construct pipeline

analysis@nerscanalysis workflows at NERSC (bilbomd, alphafold, docking)analysis workflows at NERSC (bilbomd, alphafold, docking)

Status: Open.

#69 In lbl-cbg/t5-commons;

· sspoon opened on May 8, 2025

Populate Jira Assets with Virus and Targets from Genbank file

Status: Open.

#68 In lbl-cbg/t5-commons;

· sspoon opened on May 6, 2025

· 

Y2/Q2 - Apr-Jun, 2025

Incorporate protein sub-region script to tracks script

Status: Open.

#66 In lbl-cbg/t5-commons;

· yonglbl opened on May 2, 2025

Generate tracks metadata files from script

Status: Open.

#65 In lbl-cbg/t5-commons;

· yonglbl opened on May 2, 2025

Require Protein ID in targets data

Status: Open.

#64 In lbl-cbg/t5-commons;

· yonglbl opened on May 1, 2025

Add "check workflow" step to Jira workflow manager

analysis@nerscanalysis workflows at NERSC (bilbomd, alphafold, docking)analysis workflows at NERSC (bilbomd, alphafold, docking)

t5commonShared code for interacting with jira and nerscShared code for interacting with jira and nersc

Status: Open.

#62 In lbl-cbg/t5-commons;

· ajtritt opened on Apr 25, 2025

· 

Y2/Q2 - Apr-Jun, 2025

Some notes on how we might "glue" t5-commons/JIRA and <code>BilboMD</code> together

analysis@nerscanalysis workflows at NERSC (bilbomd, alphafold, docking)analysis workflows at NERSC (bilbomd, alphafold, docking)

Status: Open.

#61 In lbl-cbg/t5-commons;

· dsclassen opened on Apr 24, 2025