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Fix maven release
Run BioKotlin Tests When Opening a PR #51: Pull request #52 opened by tcasstevens
June 2, 2025 16:20 5m 20s fix-maven-release
June 2, 2025 16:20 5m 20s
Release version 1
Run BioKotlin Tests When Opening a PR #50: Pull request #51 opened by tcasstevens
May 28, 2025 17:42 5m 20s release-version-1
May 28, 2025 17:42 5m 20s
Fix maven release
Run BioKotlin Tests When Opening a PR #49: Pull request #50 opened by tcasstevens
May 23, 2025 02:09 3m 1s fix-maven-release
May 23, 2025 02:09 3m 1s
Remove kegg
Run BioKotlin Tests When Opening a PR #48: Pull request #49 opened by tcasstevens
May 19, 2025 16:25 2m 57s remove-kegg
May 19, 2025 16:25 2m 57s
Added method mergeGVCFs that takes a list of input files. Existing me…
Run BioKotlin Tests When Opening a PR #47: Pull request #48 opened by tcasstevens
May 5, 2025 11:59 3m 50s merge-gvcfs-method-filenames
May 5, 2025 11:59 3m 50s
Fix reading GFF files where parent lines are after child lines
Run BioKotlin Tests When Opening a PR #46: Pull request #47 opened by tcasstevens
March 13, 2025 11:05 3m 57s fix-read-gff-parent-id
March 13, 2025 11:05 3m 57s
Fixing RAM issues with MAFToGVCF. This should reduce RAM requirement…
Run BioKotlin Tests When Opening a PR #45: Pull request #46 opened by zrm22
March 11, 2025 19:17 3m 53s fix-maf-to-gvcf-efficiency
March 11, 2025 19:17 3m 53s
Fix closing last file written in merge-gvcfs
Run BioKotlin Tests When Opening a PR #44: Pull request #45 opened by tcasstevens
January 9, 2025 12:29 3m 59s fix-closing-merge-gvcfs
January 9, 2025 12:29 3m 59s
Advanced imputation metrics
Run BioKotlin Tests When Opening a PR #43: Pull request #44 opened by tcasstevens
November 12, 2024 19:10 4m 7s advancedImputation_metrics
November 12, 2024 19:10 4m 7s
Run BioKotlin Tests When Opening a PR
Run BioKotlin Tests When Opening a PR #42: Manually run by tcasstevens
August 22, 2024 17:37 3m 58s fix-nuqseqio-gz
August 22, 2024 17:37 3m 58s
Fix nuqseqio gz
Run BioKotlin Tests When Opening a PR #41: Pull request #43 opened by tcasstevens
August 22, 2024 15:59 1m 5s fix-nuqseqio-gz
August 22, 2024 15:59 1m 5s
Publish maven
Run BioKotlin Tests When Opening a PR #40: Pull request #42 opened by tcasstevens
August 7, 2024 18:55 4m 2s publish-maven
August 7, 2024 18:55 4m 2s
Run BioKotlin Tests When Opening a PR
Run BioKotlin Tests When Opening a PR #39: Manually run by lynnjo
July 26, 2024 17:02 3m 21s master
July 26, 2024 17:02 3m 21s
Run BioKotlin Tests When Opening a PR
Run BioKotlin Tests When Opening a PR #38: Manually run by lynnjo
July 26, 2024 14:55 8m 31s master
July 26, 2024 14:55 8m 31s
Remove clikt
Run BioKotlin Tests When Opening a PR #37: Pull request #41 opened by tcasstevens
July 25, 2024 20:20 3m 51s remove-clikt
July 25, 2024 20:20 3m 51s
fixes for 2 failing KeggDB junit tests
Run BioKotlin Tests When Opening a PR #36: Pull request #40 opened by lynnjo
July 24, 2024 14:31 4m 28s fixKeggJunits
July 24, 2024 14:31 4m 28s
Adding LICENSE file
Run BioKotlin Tests When Opening a PR #35: Pull request #39 opened by tcasstevens
July 22, 2024 20:19 4m 0s add-license
July 22, 2024 20:19 4m 0s
added check for missing file in SeqIO
Run BioKotlin Tests When Opening a PR #34: Pull request #38 opened by lynnjo
July 22, 2024 12:34 4m 0s seqIO_throwExceptionMissingFile
July 22, 2024 12:34 4m 0s
updated writeFastq() so that it adds an '@' before the record id
Run BioKotlin Tests When Opening a PR #33: Pull request #37 opened by AGanesan12
July 18, 2024 13:38 3m 58s additional-seqIO
July 18, 2024 13:38 3m 58s
Additional seq io
Run BioKotlin Tests When Opening a PR #32: Pull request #36 opened by AGanesan12
July 15, 2024 15:16 3m 54s additional-seqIO
July 15, 2024 15:16 3m 54s
Maf to gvcf update
Run BioKotlin Tests When Opening a PR #31: Pull request #35 opened by zrm22
July 12, 2024 17:48 3m 55s maf-to-gvcf-update
July 12, 2024 17:48 3m 55s
Changed merge-gvcfs deletion handling to call <DEL> when padding base…
Run BioKotlin Tests When Opening a PR #30: Pull request #34 opened by tcasstevens
July 10, 2024 13:14 4m 21s merge-gvcfs-del
July 10, 2024 13:14 4m 21s
Changed merge-gvcfs to only first base of deletion as reference if it…
Run BioKotlin Tests When Opening a PR #29: Pull request #33 opened by tcasstevens
July 3, 2024 19:48 3m 58s merge-gvcfs-del-padded-base
July 3, 2024 19:48 3m 58s
Fasta gzip ext
Run BioKotlin Tests When Opening a PR #28: Pull request #32 opened by tcasstevens
July 2, 2024 19:12 3m 46s fasta-gzip-ext
July 2, 2024 19:12 3m 46s
Mutate proteins
Run BioKotlin Tests When Opening a PR #27: Pull request #31 opened by tcasstevens
July 1, 2024 17:56 4m 1s mutate-proteins
July 1, 2024 17:56 4m 1s