ChromatinDynamics2020-Analysis

Analysis corresponding to the paper "Dynamics of Chromatin Accessibility in Cortical Interneurons"

This repo contains the analysis performed to produce figures pertaining to the Gene Regulatory Network inference analysis.

Name		Name	Last commit message	Last commit date
Latest commit History 31 Commits
__pycache__		__pycache__
ipynb		ipynb
.gitattributes		.gitattributes
.gitignore		.gitignore
Mef2cKO_BuildCellExpressionFromGRN.py		Mef2cKO_BuildCellExpressionFromGRN.py
README.md		README.md
TimeSeriesAnalysis_E18P2P28_P2Mef2cKO.py		TimeSeriesAnalysis_E18P2P28_P2Mef2cKO.py
functions.py		functions.py
panelA_number_expressed_genes.pdf		panelA_number_expressed_genes.pdf
panelB_total_number_edges.pdf		panelB_total_number_edges.pdf
panelC_shared_edges_pv_sst.pdf		panelC_shared_edges_pv_sst.pdf
panelD_fraction_unique_edges_pv_sst.pdf		panelD_fraction_unique_edges_pv_sst.pdf
panelF_Targets_among_networks.pdf		panelF_Targets_among_networks.pdf
panelG_stats.pdf		panelG_stats.pdf
panelG_unique_celltype_edges_for_non_specific_TFS.pdf		panelG_unique_celltype_edges_for_non_specific_TFS.pdf

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