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Achievement: Arctic Code Vault ContributorAchievement: Pull Sharkx2

Achievements

Achievement: Arctic Code Vault ContributorAchievement: Pull Sharkx2

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mariya/README.md

About

I have been a software engineer for over twenty years. I am currently finishing a PhD in applied machine learning at Uppsala University, using explainable AI to untangle the genetics of childhood leukemia.

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  1. Molmed/conformist Molmed/conformist Public

    A conformal prediction framework implementing conformal risk control, providing statistically guaranteed prediction sets for any classifier.

    Python 3

  2. Molmed/ALLCoP Molmed/ALLCoP Public

    Conformal prediction for acute lymphoblastic leukemia (ALL) RNA-seq classifiers

    Python 1

  3. Molmed/allium Molmed/allium Public

    The ALLIUM classifier for predicting Acute Lymphoblastic Leukemia subtype using RNA-seq and DNA methylation data.

    R 2

  4. Molmed/gene-thesaurus Molmed/gene-thesaurus Public

    Translates from older gene name aliases to the current HGNC standard gene name

    Python 3

  5. Molmed/checkQC Molmed/checkQC Public

    CheckQC inspects the content of an Illumina runfolder and determines if it passes a set of quality criteria

    Python 28 17

  6. arteria-project/arteria-packs arteria-project/arteria-packs Public

    StackStorm packs to automate sequencing center operations

    Python 10 20