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@maxplanck-ie

Max Planck Institute of Immunobiology and Epigenetics

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  1. snakepipes snakepipes Public

    Customizable workflows based on snakemake and python for the analysis of NGS data

    Python 399 87

  2. parkour parkour Public archive

    Moved to: https://github.com/maxplanck-ie/parkour2

    JavaScript 34 14

  3. parkour2 parkour2 Public

    Parkour2: Laboratory Information Management System 👩🏻‍🔬 🧬 👨🏽‍💻

    Python 32 8

  4. HiCAssembler HiCAssembler Public

    Software to assemble contigs/scaffolds into chromosomes using Hi-C data

    Python 29 4

  5. rna-seq-qc rna-seq-qc Public

    Rna-seq pipeline, From FASTQ to differential expression analysis...

    Python 21 12

  6. 10X_snakepipe 10X_snakepipe Public

    A snakemake pipeline for 10X genomics cellranger

    Python 21 4

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