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Consider isolating phate dependency more

maintenanceMaintenance workMaintenance work

representationRepresentation learning (SSL)Representation learning (SSL)

Status: Open.

#263 In mehta-lab/VisCy;

· ziw-liu opened on Jun 18, 2025

Question about batch and error appearing

questionFurther information is requestedFurther information is requested

translationImage translation (VS)Image translation (VS)

Status: Open.

#237 In mehta-lab/VisCy;

· shannonhandley opened on Apr 4, 2025

Implement batched GPU transforms

enhancementNew feature or requestNew feature or request

representationRepresentation learning (SSL)Representation learning (SSL)

translationImage translation (VS)Image translation (VS)

Status: Open.

#232 In mehta-lab/VisCy;

· ziw-liu opened on Mar 27, 2025

 ·  

v0.4.0

Remove Cellpose dependency

maintenanceMaintenance workMaintenance work

translationImage translation (VS)Image translation (VS)

Status: Open.

#231 In mehta-lab/VisCy;

· ziw-liu opened on Mar 26, 2025

 ·  

v0.4.0

Add a method ignore certain wells for training/validation

enhancementNew feature or requestNew feature or request

Status: Open.

#205 In mehta-lab/VisCy;

· edyoshikun opened on Nov 18, 2024

OOM issues with 3D FCMAE fine-tuning

bugSomething isn't workingSomething isn't working

translationImage translation (VS)Image translation (VS)

Status: Open.

#201 In mehta-lab/VisCy;

· edyoshikun opened on Nov 5, 2024

Investigate kvikio

enhancementNew feature or requestNew feature or request

Status: Open.

#199 In mehta-lab/VisCy;

· ziw-liu opened on Nov 4, 2024

Add PCA to prediction of contrastive models

enhancementNew feature or requestNew feature or request

representationRepresentation learning (SSL)Representation learning (SSL)

Status: Open.

#191 In mehta-lab/VisCy;

· ziw-liu opened on Oct 18, 2024

Document representation evaluation functions

documentationImprovements or additions to documentationImprovements or additions to documentation

representationRepresentation learning (SSL)Representation learning (SSL)

Status: Open.

#177 In mehta-lab/VisCy;

· ziw-liu opened on Sep 27, 2024

 ·  

v0.4.0

explainability tools for representation

enhancementNew feature or requestNew feature or request

representationRepresentation learning (SSL)Representation learning (SSL)

Status: Open.

#157 In mehta-lab/VisCy;

· mattersoflight opened on Sep 9, 2024

 ·  

v0.4.0

Log embeddings in TensorBoard

enhancementNew feature or requestNew feature or request

representationRepresentation learning (SSL)Representation learning (SSL)

Status: Open.

#155 In mehta-lab/VisCy;

· ziw-liu opened on Sep 1, 2024

 ·  

v0.4.0

Move to NumPy style docstrings?

documentationImprovements or additions to documentationImprovements or additions to documentation

maintenanceMaintenance workMaintenance work

Status: Open.

#133 In mehta-lab/VisCy;

· ziw-liu opened on Aug 13, 2024

 ·  

v0.4.0