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mhurtado13/README.md

Marcelo Hurtado 👨‍💻

Bioinformatics Scientist

👾  About Me

  • 👩‍🔬 PhD student in Computational Biology.
  • 🧬 Research interests in Cancer biology and Immunooncology.
  • 🔭 Currently working in modeling multiscale and multicellular systems in Cancer Biology.
  • 💻 Experienced working with transcriptomics data (bulk and scRNAseq), cell deconvolution, machine learning, data visualization, and data analysis in R and Python.
  • 👨‍💻 Additional experience using computational tools for genome editing (CRISPR Cas9, gRNAs, Zinc Fingers).
  • 🌱 Interested in learning about spatial transcriptomics, reinforcement learning and epigenomics.

Connect with me:

@marcelohurt13 marcelo-hurtado/ marcelo-hurtado/

Languages and Tools:

R Python  HTML5  CSS3  Git  GitHub  LINUX VSCode  MySQL Cpp 

Activity Statistics

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  1. VeraPancaldiLab/multideconv VeraPancaldiLab/multideconv Public

    Integrative pipeline for cell type deconvolution from bulk RNAseq using first and second generation methods

    R 2

  2. VeraPancaldiLab/pipeML VeraPancaldiLab/pipeML Public

    A robust R machine learning pipeline for classification tasks and survival analysis.

    R

  3. ABM_NLC-CLL ABM_NLC-CLL Public

    Physicell model of NLC-CLL differentiation

    Jupyter Notebook 1

  4. NLC-CLL_HPC_exploration NLC-CLL_HPC_exploration Public

    HPC exploration of parameters for NLC-CLL physicell model

    Jupyter Notebook

  5. VeraPancaldiLab/LungPredict1_paper VeraPancaldiLab/LungPredict1_paper Public

    Profiling the Non-Small Cell Lung Cancer (NSCLC) microenvironment by integrating transcriptomics to uncover potential phenotypic profiles associated to patterns in immune infiltration

    R 3

  6. VeraPancaldiLab/multideconv_paper VeraPancaldiLab/multideconv_paper Public

    Repository containing the analysis and results for the multideconv paper

    R