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Fetch and compile NMDC Runtime documentation

Reorder cp commands to avoid overwriting previously-copied directories #13

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Reorder cp commands to avoid overwriting previously-copied directories

Reorder cp commands to avoid overwriting previously-copied directories #13

Workflow file for this run

.github/workflows/fetch-and-compile-nmdc-runtime-documentation.yml at 212e57b
name: Fetch and compile NMDC Runtime documentation
on:
push: { branches: [ main ] }
workflow_dispatch: { }
# Allow this workflow to be called by other workflows.
# Reference: https://docs.github.com/en/actions/using-workflows/reusing-workflows
workflow_call: { }
jobs:
compile:
name: Compile
runs-on: ubuntu-latest
steps:
# Docs: https://github.com/actions/checkout
- name: Check out commit
uses: actions/checkout@v4
- name: Check out commit from `nmdc-runtime/main`
uses: actions/checkout@v4
with:
# Notes:
# - `repository` format is: "{owner_name}/{repo_name}"
# - `sparse-checkout` lists the same files as the `mkdocs.yml` GHA workflow in `nmdc-runtime`
repository: microbiomedata/nmdc-runtime # format is "{owner_name}/{repo_name}"
ref: main
sparse-checkout: |
docs
mkdocs_overrides
mkdocs.yml
path: _clones/microbiomedata/nmdc-runtime # where, locally, to create the clone
# Docs: https://github.com/actions/setup-python
- name: Set up Python
uses: actions/setup-python@v5
with: { python-version: '3.12' }
- name: Install own dependencies
run: python -m pip install -r src/nmdc_runtime/requirements.txt
- name: Customize MkDocs configuration
working-directory: _clones/microbiomedata/nmdc-runtime
run: python ${{ github.workspace }}/src/nmdc_runtime/modify_mkdocs_config.py mkdocs.yml mkdocs.yml
- name: Install dependencies of `nmdc-runtime` docs
run: python -m pip install mkdocs-material mkdocs-mermaid2-plugin mkdocs-jupyter
# Docs: https://www.mkdocs.org/user-guide/cli/
- name: Compile source documents into HTML
working-directory: _clones/microbiomedata/nmdc-runtime
run: mkdocs build --site-dir ${{ github.workspace }}/_dist
# Upload the result as an "artifact" so it can then be downloaded and used by another job.
- name: Save the HTML for publishing later # Docs: https://github.com/actions/upload-artifact
uses: actions/upload-artifact@v4
with:
name: nmdc-runtime-documentation-as-html
# Note: Relative `path` values here are relative to the _workspace_, not to the current working directory.
# Reference: https://github.com/actions/upload-artifact/pull/477#issue-2044900649
path: _dist
if-no-files-found: error
retention-days: 1 # Note: 1 day is the shortest period possible