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Create test instance of each workflow that leaverage Berkeley schema & new runtime #220

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mbthornton-lbl opened this issue Jul 24, 2024 · 4 comments
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@mbthornton-lbl
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mbthornton-lbl commented Jul 24, 2024

Covers:

G1 All: Create test instance of each workflow that leaverage Berkeley schema & new runtime

Create updated Workflows for:

  • Sequencing Noninterleaved
  • Sequencing Interleaved
  • Reads QC
  • Reads QC Interleave
  • Metagenome Assembly
  • Metagenome Annotation
  • MAGs
  • Readbased Analysis

For each of the above Workflows:

  • Create workflow unit tests
  • Implement basic CI to run unit tests
@ssarrafan
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removing from sprint, last day of sprint, already has backlog label on it

@aclum
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aclum commented Sep 24, 2024

Sequencing Interleaved & Sequencing Noninterleaved are not part of MVP and need to be deprecated eventually.

@mslarae13
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@mbthornton-lbl can we remove this from this squad board?
It sounds like this task is being worked on but I'd like to close out the project board.

Is this being tracked elsewhere? Or just not currently being worked on?
@aclum

@aclum
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aclum commented Nov 15, 2024

Doesn't appear to be active.

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4 participants