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Multiple Outbreak Detection System (MODS).

Author: John Aronis, University of Pittsburgh

This project uses the Maven project management tool. Please install Maven before continuing to read this document. Maven can be downloaded from https://maven.apache.org/download.cgi.

To run MODS, first build the executable jar file by executing the command:

mvn package

Once the package is built, run with:

java -jar target/mods-1.0-SNAPSHOT-jar-with-dependencies.jar <data> <models> <start>

The parameters are as follows:

  • data: the (full or relative path name to) the input file
  • models: the number of models to test
  • start: is the day to start making predictions (where the first day of the data file is day 0).

Funding Acknowledgement

MODS was funded by National Institutes of Health grant R01 LM011370 on Probabilistic Disease Surveillance.