mill-ornrakorn · mill-ornrakorn · Jul 31, 2023 · Jul 31, 2023 · Jul 31, 2023 · Jul 31, 2023
diff --git a/.Rbuildignore b/.Rbuildignore
@@ -0,0 +1,2 @@
+^.*\.Rproj$
+^\.Rproj\.user$
diff --git a/.gitignore b/.gitignore
@@ -1,4 +1,3 @@
-
 .Rhistory
 .RData
 note for update.txt
@@ -9,3 +8,4 @@ sample data/suicide_th_data_sample - Copy.csv
 test cal col.R
 sample data/suicide_th_data_sample - อันเดิม.csv
 pic for manual
+shiny/testing_accordion.R
diff --git a/DESCRIPTION b/DESCRIPTION
@@ -0,0 +1,31 @@
+Package: STEHealthApp
+Type: Package
+Title: An application for analyzing space-time pattern and association with risk factors of suicide and other health outcomes
+Version: 1.2
+Author: Ornrakorn Mekchaiporn, Papin Thanutchapat, Chiraphat Phoncharoenwirote
+Maintainer: Ornrakorn Mekchaiporn <[email protected]>
+Description: Allows users to import their own data, analyze, visualize, and export result.
+Imports: 
+  shiny, 
+  shinydashboard, 
+  shinyjs, 
+  shinyBS,
+  leaflet,
+  dplyr, 
+  ggplot2,
+  RColorBrewer,
+  rgdal,
+  shinyWidgets,
+  shinydashboardPlus,
+  spdep,
+  leaflet.extras,
+  bsplus,
+  remotes
+Suggests:
+  INLA, 
+  capture
+Additional_repositories: https://inla.r-inla-download.org/R/stable
+URL: https://github.com/mill-ornrakorn/STEHealth-Application
+License: ?
+Encoding: UTF-8
+LazyData: true
diff --git a/NAMESPACE b/NAMESPACE
@@ -0,0 +1 @@
+exportPattern("^[[:alpha:]]+")
diff --git a/R/STEHealthApp.R b/R/STEHealthApp.R
@@ -0,0 +1,9 @@
+#' STEHealthApp: a shiny application for analyzing space-time pattern, cluster detection, and association with risk factors of health outcomes
+#'
+#'
+#' @docType package
+#' @name STEHealthApp
+NULL
+
+
+
diff --git a/R/rfunctions.R b/R/rfunctions.R
@@ -0,0 +1,6 @@
+#' Runs the Shiny web application.
+#' @export
+run_app <- function() {
+  shiny::runApp(system.file('STEHealthApp', package='STEHealthApp'))
+}
+
diff --git a/STEHealthApp.Rproj b/STEHealthApp.Rproj
@@ -0,0 +1,20 @@
+Version: 1.0
+
+RestoreWorkspace: Default
+SaveWorkspace: Default
+AlwaysSaveHistory: Default
+
+EnableCodeIndexing: Yes
+UseSpacesForTab: Yes
+NumSpacesForTab: 2
+Encoding: UTF-8
+
+RnwWeave: Sweave
+LaTeX: pdfLaTeX
+
+AutoAppendNewline: Yes
+StripTrailingWhitespace: Yes
+
+BuildType: Package
+PackageUseDevtools: Yes
+PackageInstallArgs: --no-multiarch --with-keep.source
diff --git a/inst/STEHealthApp/.gitignore b/inst/STEHealthApp/.gitignore
@@ -0,0 +1,11 @@
+
+.Rhistory
+.RData
+note for update.txt
+note for app update.txt
+note for manual update.txt
+sample data/suicide_th_data_sampl_1.csv
+sample data/suicide_th_data_sample - Copy.csv
+test cal col.R
+sample data/suicide_th_data_sample - อันเดิม.csv
+pic for manual
diff --git a/shiny/Manual.md → inst/STEHealthApp/Manual.md b/shiny/Manual.md → inst/STEHealthApp/Manual.md
diff --git a/shiny/about_webapp.md → inst/STEHealthApp/about_webapp.md b/shiny/about_webapp.md → inst/STEHealthApp/about_webapp.md
@@ -15,7 +15,7 @@ users. Moreover, the previously developed user interfaces do not provide specifi
 
 </br>
 
-&emsp;&emsp; **STEHealth** (It stands for **S**patiotemporal **E**pidemiological **Health**) is a application for analyzing space-time pattern, cluster detection, and association with risk factors of health outcomes, which allows users to import their own data, analyze, and visualize.
+&emsp;&emsp; **STEHealth** (It stands for **S**patiotemporal **E**pidemiological **Health**) is an application for analyzing space-time pattern, cluster detection, and association with risk factors of health outcomes, which allows users to import their own data, analyze, and visualize.
 This application is part of "Spatiotemporal Analysis with Application Development for Epidemiological Study of Suicide Mortality" project of the [King Mongkut's University of Technology Thonburi](https://www.kmutt.ac.th/en/). 
 
 

diff --git a/shiny/help.md → inst/STEHealthApp/help.md b/shiny/help.md → inst/STEHealthApp/help.md
diff --git a/shiny/releases.md → inst/STEHealthApp/releases.md b/shiny/releases.md → inst/STEHealthApp/releases.md
diff --git a/sample data/gadm40_THA_1.dbf → ...STEHealthApp/sample data/gadm40_THA_1.dbf b/sample data/gadm40_THA_1.dbf → ...STEHealthApp/sample data/gadm40_THA_1.dbf
diff --git a/sample data/gadm40_THA_1.prj → ...STEHealthApp/sample data/gadm40_THA_1.prj b/sample data/gadm40_THA_1.prj → ...STEHealthApp/sample data/gadm40_THA_1.prj
diff --git a/sample data/gadm40_THA_1.shp → ...STEHealthApp/sample data/gadm40_THA_1.shp b/sample data/gadm40_THA_1.shp → ...STEHealthApp/sample data/gadm40_THA_1.shp
diff --git a/sample data/gadm40_THA_1.shx → ...STEHealthApp/sample data/gadm40_THA_1.shx b/sample data/gadm40_THA_1.shx → ...STEHealthApp/sample data/gadm40_THA_1.shx
diff --git a/sample data/suicide_th_data_sample.csv → ...pp/sample data/suicide_th_data_sample.csv b/sample data/suicide_th_data_sample.csv → ...pp/sample data/suicide_th_data_sample.csv
diff --git a/...a/suicide_th_data_sample_have_e_value.csv → ...a/suicide_th_data_sample_have_e_value.csv b/...a/suicide_th_data_sample_have_e_value.csv → ...a/suicide_th_data_sample_have_e_value.csv
-Original file line number
+Diff line change
@@ Expand Up @@
     </br>
-    &emsp;&emsp; **STEHealth** (It stands for **S**patiotemporal **E**pidemiological **Health**) is a application for analyzing space-time pattern, cluster detection, and association with risk factors of health outcomes, which allows users to import their own data, analyze, and visualize.
+    &emsp;&emsp; **STEHealth** (It stands for **S**patiotemporal **E**pidemiological **Health**) is an application for analyzing space-time pattern, cluster detection, and association with risk factors of health outcomes, which allows users to import their own data, analyze, and visualize.
     This application is part of "Spatiotemporal Analysis with Application Development for Epidemiological Study of Suicide Mortality" project of the [King Mongkut's University of Technology Thonburi](https://www.kmutt.ac.th/en/).
@@ Expand Down @@