Code repository to run analyses for Nishiguchi, T. and Ishikawa, A. "Convergent gene duplication in Arctic and Antarctic teleost fishes."
Snakemake is used to manage the workflow.
To execute the workflow, Singularity must be installed on your system.
Navigate to the cloned repository, substituting /path/to/repo with the actual path on your system:
cd /path/to/repo
Pull a snakemake image:
singularity pull docker://snakemake/snakemake:v7.32.4
Run the workflow:
singularity run snakemake_v7.32.4.sif snakemake --use-singularity --cores 1
The output files will be generated in the data folder.
The code in this repository is licensed under the MIT license.