reordered lines of environment.txt #40
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| name: CI | |
| on: | |
| # GitHub has started calling new repo's first branch "main" https://github.com/github/renaming | |
| # Existing codes likely still have "master" as the primary branch | |
| # Both are tracked here to keep legacy and new codes working | |
| push: | |
| branches: | |
| - "master" | |
| - "main" | |
| pull_request: | |
| branches: | |
| - "master" | |
| - "main" | |
| jobs: | |
| CI: | |
| name: Test on ${{ matrix.os }}, Python ${{ matrix.python-version }} | |
| runs-on: ${{ matrix.os }} | |
| strategy: | |
| matrix: | |
| os: ["ubuntu-latest"] | |
| python-version: ["3.8"] | |
| # include: | |
| # - os: ubuntu-latest | |
| # python-version: 3.7 | |
| defaults: | |
| run: | |
| shell: bash -l {0} | |
| steps: | |
| - uses: actions/checkout@v3 | |
| - name: Additional info about the build | |
| run: | | |
| uname -a | |
| df -h | |
| ulimit -a | |
| # More info on the whole conda setup: https://github.com/conda-incubator/setup-miniconda | |
| - name: Setup Conda | |
| uses: conda-incubator/setup-miniconda@v2 | |
| id: conda-setup | |
| with: | |
| miniforge-variant: Mambaforge | |
| miniforge-version: latest | |
| activate-environment: SESAMI_web_git | |
| # Get date for the cache key | |
| - name: Get current time | |
| uses: josStorer/[email protected] | |
| id: current-time | |
| # Actual caching | |
| - name: Cache conda env | |
| uses: actions/cache@v3 | |
| id: cache | |
| env: | |
| # Increase this value to reset cache if mols.yml has not changed | |
| CACHE_NUMBER: 0 | |
| with: | |
| # TODO: Figure out how to avoid this hard coded path. For some reason $CONDA does not work. | |
| path: /usr/share/miniconda/envs/SESAMI_web_git | |
| key: | |
| # Key contains current year and month to ensure it is updated once a month | |
| ${{ runner.os }}-${{ runner.arch }}-conda-${{ steps.current-time.outputs.year }}-${{ | |
| steps.current-time.outputs.month }}-${{ hashFiles('devtools/conda-envs/mols.yml') }}-${{ | |
| env.CACHE_NUMBER }} | |
| # Install environment from yaml file if cache-hit == false | |
| - name: Update conda env | |
| run: mamba env update -n SESAMI_web_git -f devtools/conda-envs/env.yml | |
| if: steps.cache.outputs.cache-hit != 'true' | |
| # - name: Debugging | |
| # run: | | |
| # pwd | |
| # ls | |
| # - name: Install package | |
| # run: | | |
| # pip install -e . | |
| # pip install pytest-cov codecov | |
| # conda list | |
| - name: Run tests | |
| run: | | |
| python -m pytest |